Literature DB >> 19293370

Uridine-ribohydrolase is a key regulator in the uridine degradation pathway of Arabidopsis.

Benjamin Jung1, Martin Flörchinger, Hans-Henning Kunz, Michaela Traub, Ruth Wartenberg, Wolfgang Jeblick, H Ekkehard Neuhaus, Torsten Möhlmann.   

Abstract

Nucleoside degradation and salvage are important metabolic pathways but hardly understood in plants. Recent work on human pathogenic protozoans like Leishmania and Trypanosoma substantiates an essential function of nucleosidase activity. Plant nucleosidases are related to those from protozoans and connect the pathways of nucleoside degradation and salvage. Here, we describe the cloning of such an enzyme from Arabidopsis thaliana, Uridine-Ribohydrolase 1 (URH1) and the characterization by complementation of a yeast mutant. Furthermore, URH1 was synthesized as a recombinant protein in Escherichia coli. The pure recombinant protein exhibited highest hydrolase activity for uridine, followed by inosine and adenosine, the corresponding K(m) values were 0.8, 1.4, and 0.7 mM, respectively. In addition, URH1 was able to cleave the cytokinin derivative isopentenyladenine-riboside. Promoter beta-glucuronidase fusion studies revealed that URH1 is mainly transcribed in the vascular cells of roots and in root tips, guard cells, and pollen. Mutants expressing the Arabidopsis enzyme or the homolog from rice (Oryza sativa) exhibit resistance toward toxic fluorouridine, fluorouracil, and fluoroorotic acid, providing clear evidence for a pivotal function of URH1 as regulative in pyrimidine degradation. Moreover, mutants with increased and decreased nucleosidase activity are delayed in germination, indicating that this enzyme activity must be well balanced in the early phase of plant development.

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Year:  2009        PMID: 19293370      PMCID: PMC2671717          DOI: 10.1105/tpc.108.062612

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  63 in total

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2.  Direct control of shoot meristem activity by a cytokinin-activating enzyme.

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Journal:  Nature       Date:  2007-02-08       Impact factor: 49.962

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Authors:  M Rafiqul Islam; Hoyeun Kim; Shin-Wook Kang; Jung-Sup Kim; Young-Min Jeong; Hyun-Ju Hwang; So-Young Lee; Je-Chang Woo; Sang-Gu Kim
Journal:  Plant Mol Biol       Date:  2007-03       Impact factor: 4.076

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Journal:  Arch Biochem Biophys       Date:  1967-03       Impact factor: 4.013

6.  Positive selection for male-sterile mutants of Arabidopsis lacking adenine phosphoribosyl transferase activity.

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Journal:  Plant Physiol       Date:  1988-04       Impact factor: 8.340

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Authors:  K von Schwartzenberg; S Kruse; R Reski; B Moffatt; M Laloue
Journal:  Plant J       Date:  1998-01       Impact factor: 6.417

9.  Development of series of gateway binary vectors, pGWBs, for realizing efficient construction of fusion genes for plant transformation.

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10.  Three-dimensional structure of the inosine-uridine nucleoside N-ribohydrolase from Crithidia fasciculata.

Authors:  M Degano; D N Gopaul; G Scapin; V L Schramm; J C Sacchettini
Journal:  Biochemistry       Date:  1996-05-14       Impact factor: 3.162

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  33 in total

1.  The rate of spontaneous cleavage of the glycosidic bond of adenosine.

Authors:  Randy B Stockbridge; Gottfried K Schroeder; Richard Wolfenden
Journal:  Bioorg Chem       Date:  2010-06-04       Impact factor: 5.275

2.  Uridine ribohydrolase and the balance between nucleotide degradation and salvage.

Authors:  Jennifer Mach
Journal:  Plant Cell       Date:  2009-03-17       Impact factor: 11.277

3.  Pyrimidine Salvage: Physiological Functions and Interaction with Chloroplast Biogenesis.

Authors:  Lisa Ohler; Sandra Niopek-Witz; Samuel E Mainguet; Torsten Möhlmann
Journal:  Plant Physiol       Date:  2019-05-17       Impact factor: 8.340

4.  Structure and function of nucleoside hydrolases from Physcomitrella patens and maize catalyzing the hydrolysis of purine, pyrimidine, and cytokinin ribosides.

Authors:  Martina Kopecná; Hanna Blaschke; David Kopecny; Armelle Vigouroux; Radka Koncitíková; Ondrej Novák; Ondrej Kotland; Miroslav Strnad; Solange Moréra; Klaus von Schwartzenberg
Journal:  Plant Physiol       Date:  2013-10-29       Impact factor: 8.340

5.  De novo pyrimidine nucleotide synthesis mainly occurs outside of plastids, but a previously undiscovered nucleobase importer provides substrates for the essential salvage pathway in Arabidopsis.

Authors:  Sandra Witz; Benjamin Jung; Sarah Fürst; Torsten Möhlmann
Journal:  Plant Cell       Date:  2012-04-03       Impact factor: 11.277

6.  Identification of the Plant Ribokinase and Discovery of a Role for Arabidopsis Ribokinase in Nucleoside Metabolism.

Authors:  John W Riggs; Nathan C Rockwell; Philip C Cavales; Judy Callis
Journal:  J Biol Chem       Date:  2016-09-06       Impact factor: 5.157

7.  Nucleotide Metabolism in Plants.

Authors:  Claus-Peter Witte; Marco Herde
Journal:  Plant Physiol       Date:  2019-10-22       Impact factor: 8.340

8.  Functional analyses of LONELY GUY cytokinin-activating enzymes reveal the importance of the direct activation pathway in Arabidopsis.

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Journal:  Plant Cell       Date:  2009-10-16       Impact factor: 11.277

9.  Of the Nine Cytidine Deaminase-Like Genes in Arabidopsis, Eight Are Pseudogenes and Only One Is Required to Maintain Pyrimidine Homeostasis in Vivo.

Authors:  Mingjia Chen; Marco Herde; Claus-Peter Witte
Journal:  Plant Physiol       Date:  2016-03-31       Impact factor: 8.340

10.  From endoplasmic reticulum to mitochondria: absence of the Arabidopsis ATP antiporter endoplasmic Reticulum Adenylate Transporter1 perturbs photorespiration.

Authors:  Christiane Hoffmann; Bartolome Plocharski; Ilka Haferkamp; Michaela Leroch; Ralph Ewald; Hermann Bauwe; Jan Riemer; Johannes M Herrmann; H Ekkehard Neuhaus
Journal:  Plant Cell       Date:  2013-07-16       Impact factor: 11.277

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