Literature DB >> 17143579

Functional characterization of a gene encoding a dual domain for uridine kinase and uracil phosphoribosyltransferase in Arabidopsis thaliana.

M Rafiqul Islam1, Hoyeun Kim, Shin-Wook Kang, Jung-Sup Kim, Young-Min Jeong, Hyun-Ju Hwang, So-Young Lee, Je-Chang Woo, Sang-Gu Kim.   

Abstract

Uridine kinase (UK) and uracil phosphoribosyltransferase (UPRT) are enzymes catalyzing the formation of uridine 5'-monophosphate (UMP) from uridine and adenine 5'-triphosphate (ATP) and from uracil and phosphoribosyl-alpha-l-pyrophosphate (PRPP), respectively, in the pyrimidine salvage pathway. Here, we report the characterization and functional analysis of a gene AtUK/UPRT1 from Arabidopsis thaliana. Sequencing of an expressed sequence tag clone of this gene revealed that it contains a full-length open reading frame of 1461 nucleotides and encodes a protein with a molecular mass of approximately 53 kDa. The sequence analysis revealed that the N-terminal region of AtUK/UPRT1 contains a UK domain and the C-terminal region consists of a UPRT domain. Expression of AtUK/UPRT1 in upp and upp-udk mutants of Escherichia coli supplied with 5-fluorouracil (5-FU) and 5-fluorouridine (5-FD) led to growth inhibition. Identical results were obtained with 5-FD and 5-FU treatments when the UK and UPRT domains were separated by the introduction of translation initiation and stop codons prior to complementation into the upp-udk and upp mutants. These results suggest that the AtUK/UPRT1 product can use uracil and uridine as substrates for the production of UMP. We also investigated the function of AtUK/UPRT1 in an Arabidopsis mutant. The wild-type Arabidopsis plants showed drastic growth retardation when they were treated with 5-FU and 5-FD while the growth of atuk/uprtl mutant plants was not significantly affected. These findings confirm that AtUK/UPRT1 has a dual role in coding for both uridine kinase and uracil phosphoribosyltransferase that form UMP through the pyrimidine salvage pathway in Arabidopsis.

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Year:  2007        PMID: 17143579     DOI: 10.1007/s11103-006-9101-3

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  31 in total

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Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

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3.  Adenovirus-mediated transduction of Escherichia coli uracil phosphoribosyltransferase gene increases the sensitivity of esophageal cancer cells to 5-fluorouracil.

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Journal:  Surg Today       Date:  2001       Impact factor: 2.549

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Journal:  J Bacteriol       Date:  1993-09       Impact factor: 3.490

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Journal:  Cancer Res       Date:  1982-03       Impact factor: 12.701

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Journal:  FEBS Lett       Date:  1982-11-01       Impact factor: 4.124

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10.  Characterization of the upp gene encoding uracil phosphoribosyltransferase of Escherichia coli K12.

Authors:  P S Andersen; J M Smith; B Mygind
Journal:  Eur J Biochem       Date:  1992-02-15
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  17 in total

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7.  Uridine-ribohydrolase is a key regulator in the uridine degradation pathway of Arabidopsis.

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8.  The Rv1712 Locus from Mycobacterium tuberculosis H37Rv codes for a functional CMP kinase that preferentially phosphorylates dCMP.

Authors:  Caroline Thum; Cristopher Z Schneider; Mario S Palma; Diógenes S Santos; Luiz A Basso
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9.  Global analysis of mRNA half-lives and de novo transcription in a dinoflagellate, Karenia brevis.

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10.  Hybrid sequencing approach applied to human fecal metagenomic clone libraries revealed clones with potential biotechnological applications.

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