Literature DB >> 19292490

Synthesis and polymerase chain reaction amplification of DNA strands containing an unnatural triazole linkage.

Afaf H El-Sagheer1, Tom Brown.   

Abstract

DNA strands containing an unnatural T-triazole-T linkage have been synthesized by click DNA ligation between oligonucleotides with 3'-AZT and 5'-propargylamido dT and amplified efficiently by polymerase chain reaction (PCR) using several different polymerases. DNA sequencing of PCR amplicons and clones in two different sequence contexts revealed the presence of a single thymidine at the ligation site. The remarkable ability of thermostable polymerases to reproducibly copy DNA templates containing such an unnatural backbone opens up intriguing possibilities in gene synthesis, genetic analysis, biology, and nanotechnology.

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Year:  2009        PMID: 19292490     DOI: 10.1021/ja8065896

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  30 in total

1.  Azide-tetrazole equilibrium of C-6 azidopurine nucleosides and their ligation reactions with alkynes.

Authors:  Mahesh K Lakshman; Manish K Singh; Damon Parrish; Raghavan Balachandran; Billy W Day
Journal:  J Org Chem       Date:  2010-04-16       Impact factor: 4.354

2.  Preparation of modified long-mer RNAs and analysis of FMN binding to the ypaA aptamer from B. subtilis.

Authors:  Jennifer Frommer; Robert Hieronymus; Tamil Selvi Arunachalam; Sabine Heeren; Maria Jenckel; Anne Strahl; Bettina Appel; Sabine Müller
Journal:  RNA Biol       Date:  2014-03-26       Impact factor: 4.652

3.  Label-free chemiresistive immunosensors for viruses.

Authors:  Dhammanand J Shirale; Mangesh A Bangar; Miso Park; Marylynn V Yates; Wilfred Chen; Nosang V Myung; Ashok Mulchandani
Journal:  Environ Sci Technol       Date:  2010-11-08       Impact factor: 9.028

4.  Biocompatible artificial DNA linker that is read through by DNA polymerases and is functional in Escherichia coli.

Authors:  Afaf H El-Sagheer; A Pia Sanzone; Rachel Gao; Ali Tavassoli; Tom Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-27       Impact factor: 11.205

5.  Strain-promoted "click" chemistry for terminal labeling of DNA.

Authors:  Isaac S Marks; Jun Sung Kang; Brady T Jones; Kevin J Landmark; Andrew J Cleland; T Andrew Taton
Journal:  Bioconjug Chem       Date:  2011-06-02       Impact factor: 4.774

6.  Synthesis and biological properties of C-2 triazolylinosine derivatives.

Authors:  Mahesh K Lakshman; Amit Kumar; Raghavan Balachandran; Billy W Day; Graciela Andrei; Robert Snoeck; Jan Balzarini
Journal:  J Org Chem       Date:  2012-07-03       Impact factor: 4.354

7.  Synthesis and properties of triazole-linked RNA.

Authors:  Daniel Mutisya; Chelliah Selvam; Scott D Kennedy; Eriks Rozners
Journal:  Bioorg Med Chem Lett       Date:  2011-04-05       Impact factor: 2.823

8.  Analysis and optimization of copper-catalyzed azide-alkyne cycloaddition for bioconjugation.

Authors:  Vu Hong; Stanislav I Presolski; Celia Ma; M G Finn
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

Review 9.  Triazole-Modified Nucleic Acids for the Application in Bioorganic and Medicinal Chemistry.

Authors:  Dagmara Baraniak; Jerzy Boryski
Journal:  Biomedicines       Date:  2021-05-31

10.  Assessing the biocompatibility of click-linked DNA in Escherichia coli.

Authors:  A Pia Sanzone; Afaf H El-Sagheer; Tom Brown; Ali Tavassoli
Journal:  Nucleic Acids Res       Date:  2012-08-16       Impact factor: 16.971

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