Literature DB >> 19289851

Smart specimen preparation for freeze substitution and serial ultrathin sectioning of yeast cells.

Masashi Yamaguchi1, Hitoshi Okada, Yuichi Namiki.   

Abstract

A smart and efficient method for freeze substitution and serial sectioning of yeast cells is described. Yeast cells were placed in a single layer between two copper disks, rapidly frozen, freeze substituted and embedded in an epoxy resin. The cell layer was re-embedded by the same resin, the surface trimmed leaving 1 mum above the cell layer, and serially sectioned. The sections were collected on the two-slit grids and placed on a Formvar film mounted to cover the holes of an aluminum supporting rack. The grids were removed from the rack, stained together using a silicon tube and observed in a transmission electron microscope. The images of yeast cells observed were clear and natural, and would be useful for a detailed 3D structural analysis such as structome.

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Year:  2009        PMID: 19289851     DOI: 10.1093/jmicro/dfp013

Source DB:  PubMed          Journal:  J Electron Microsc (Tokyo)        ISSN: 0022-0744


  11 in total

1.  A Method for Obtaining Serial Ultrathin Sections of Microorganisms in Transmission Electron Microscopy.

Authors:  Masashi Yamaguchi; Hiroji Chibana
Journal:  J Vis Exp       Date:  2018-01-17       Impact factor: 1.355

2.  Absence of fks1p in lager brewing yeast results in aberrant cell wall composition and improved beer flavor stability.

Authors:  Jin-jing Wang; Wei-na Xu; Xin'er Li; Jia Li; Qi Li
Journal:  World J Microbiol Biotechnol       Date:  2014-02-01       Impact factor: 3.312

3.  Creation, characterization and utilization of Cryptococcus neoformans mutants sensitive to micafungin.

Authors:  Akio Toh-E; Misako Ohkusu; Kiminori Shimizu; Masashi Yamaguchi; Naruhiko Ishiwada; Akira Watanabe; Katsuhiko Kamei
Journal:  Curr Genet       Date:  2017-05-30       Impact factor: 3.886

4.  Functional analysis of the α-1,3-glucan synthase genes agsA and agsB in Aspergillus nidulans: agsB is the major α-1,3-glucan synthase in this fungus.

Authors:  Akira Yoshimi; Motoaki Sano; Azusa Inaba; Yuko Kokubun; Tomonori Fujioka; Osamu Mizutani; Daisuke Hagiwara; Takashi Fujikawa; Marie Nishimura; Shigekazu Yano; Shin Kasahara; Kiminori Shimizu; Masashi Yamaguchi; Kazuyoshi Kawakami; Keietsu Abe
Journal:  PLoS One       Date:  2013-01-24       Impact factor: 3.240

5.  Structome analysis of virulent Mycobacterium tuberculosis, which survives with only 700 ribosomes per 0.1 fl of cytoplasm.

Authors:  Hiroyuki Yamada; Masashi Yamaguchi; Kinuyo Chikamatsu; Akio Aono; Satoshi Mitarai
Journal:  PLoS One       Date:  2015-01-28       Impact factor: 3.240

6.  Altered intracellular signaling by imatinib increases the anti-cancer effects of tyrosine kinase inhibitors in chronic myelogenous leukemia cells.

Authors:  Takuya Hirao; Masashi Yamaguchi; Megumi Kikuya; Hiroji Chibana; Kousei Ito; Shigeki Aoki
Journal:  Cancer Sci       Date:  2017-12-07       Impact factor: 6.716

Review 7.  Electron microscopy for ultrastructural analysis and protein localization in Saccharomyces cerevisiae.

Authors:  Andri Frankl; Muriel Mari; Fulvio Reggiori
Journal:  Microb Cell       Date:  2015-10-12

8.  KLF4 is required for suppression of histamine synthesis by polyamines during bone marrow-derived mast cell differentiation.

Authors:  Kazuhiro Nishimura; Moemi Okamoto; Rina Shibue; Toshio Mizuta; Toru Shibayama; Tetsuhiko Yoshino; Teruki Murakami; Masashi Yamaguchi; Satoshi Tanaka; Toshihiko Toida; Kazuei Igarashi
Journal:  PLoS One       Date:  2020-02-26       Impact factor: 3.240

9.  Shift in energy metabolism caused by glucocorticoids enhances the effect of cytotoxic anti-cancer drugs against acute lymphoblastic leukemia cells.

Authors:  Shigeki Aoki; Michie Morita; Takuya Hirao; Masashi Yamaguchi; Reika Shiratori; Megumi Kikuya; Hiroji Chibana; Kousei Ito
Journal:  Oncotarget       Date:  2017-10-09

10.  Mycolicibacterium smegmatis, Basonym Mycobacterium smegmatis, Expresses Morphological Phenotypes Much More Similar to Escherichia coli Than Mycobacterium tuberculosis in Quantitative Structome Analysis and CryoTEM Examination.

Authors:  Hiroyuki Yamada; Masashi Yamaguchi; Yuriko Igarashi; Kinuyo Chikamatsu; Akio Aono; Yoshiro Murase; Yuta Morishige; Akiko Takaki; Hiroji Chibana; Satoshi Mitarai
Journal:  Front Microbiol       Date:  2018-09-11       Impact factor: 5.640

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