Literature DB >> 19286465

Spatial and temporal reproducibility-based ranking of the independent components of BOLD fMRI data.

Weiming Zeng1, Anqi Qiu, BettyAnn Chodkowski, James J Pekar.   

Abstract

Independent component analysis (ICA) decomposes fMRI data into spatially independent maps and their corresponding time courses. However, distinguishing the neurobiologically and biophysically reasonable components from those representing noise and artifacts is not trivial. We present a simple method for the ranking of independent components, by assessing the resemblance between components estimated from all the data, and components estimated from only the odd- (or even-) numbered time points. We show that the meaningful independent components of fMRI data resemble independent components estimated from downsampled data, and thus tend to be highly ranked by the method.

Entities:  

Mesh:

Year:  2009        PMID: 19286465      PMCID: PMC2746867          DOI: 10.1016/j.neuroimage.2009.02.048

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  15 in total

1.  Detection of consistently task-related activations in fMRI data with hybrid independent component analysis.

Authors:  M J McKeown
Journal:  Neuroimage       Date:  2000-01       Impact factor: 6.556

2.  Power spectrum ranked independent component analysis of a periodic fMRI complex motor paradigm.

Authors:  Chad H Moritz; Baxter P Rogers; M Elizabeth Meyerand
Journal:  Hum Brain Mapp       Date:  2003-02       Impact factor: 5.038

3.  Validating the independent components of neuroimaging time series via clustering and visualization.

Authors:  Johan Himberg; Aapo Hyvärinen; Fabrizio Esposito
Journal:  Neuroimage       Date:  2004-07       Impact factor: 6.556

4.  Multilevel linear modelling for FMRI group analysis using Bayesian inference.

Authors:  Mark W Woolrich; Timothy E J Behrens; Christian F Beckmann; Mark Jenkinson; Stephen M Smith
Journal:  Neuroimage       Date:  2004-04       Impact factor: 6.556

5.  Probabilistic independent component analysis for functional magnetic resonance imaging.

Authors:  Christian F Beckmann; Stephen M Smith
Journal:  IEEE Trans Med Imaging       Date:  2004-02       Impact factor: 10.048

Review 6.  Advances in functional and structural MR image analysis and implementation as FSL.

Authors:  Stephen M Smith; Mark Jenkinson; Mark W Woolrich; Christian F Beckmann; Timothy E J Behrens; Heidi Johansen-Berg; Peter R Bannister; Marilena De Luca; Ivana Drobnjak; David E Flitney; Rami K Niazy; James Saunders; John Vickers; Yongyue Zhang; Nicola De Stefano; J Michael Brady; Paul M Matthews
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

7.  Ranking and averaging independent component analysis by reproducibility (RAICAR).

Authors:  Zhi Yang; Stephen LaConte; Xuchu Weng; Xiaoping Hu
Journal:  Hum Brain Mapp       Date:  2008-06       Impact factor: 5.038

8.  Analysis of fMRI data by blind separation into independent spatial components.

Authors:  M J McKeown; S Makeig; G G Brown; T P Jung; S S Kindermann; A J Bell; T J Sejnowski
Journal:  Hum Brain Mapp       Date:  1998       Impact factor: 5.038

9.  Spatially independent activity patterns in functional MRI data during the stroop color-naming task.

Authors:  M J McKeown; T P Jung; S Makeig; G Brown; S S Kindermann; T W Lee; T J Sejnowski
Journal:  Proc Natl Acad Sci U S A       Date:  1998-02-03       Impact factor: 11.205

10.  Analysis of fMRI time-series revisited.

Authors:  K J Friston; A P Holmes; J B Poline; P J Grasby; S C Williams; R S Frackowiak; R Turner
Journal:  Neuroimage       Date:  1995-03       Impact factor: 6.556

View more
  6 in total

1.  Deconvolution filtering: temporal smoothing revisited.

Authors:  Keith Bush; Josh Cisler
Journal:  Magn Reson Imaging       Date:  2014-03-15       Impact factor: 2.546

2.  A comparison of statistical methods for detecting context-modulated functional connectivity in fMRI.

Authors:  Josh M Cisler; Keith Bush; J Scott Steele
Journal:  Neuroimage       Date:  2013-09-18       Impact factor: 6.556

3.  On the relationship between seed-based and ICA-based measures of functional connectivity.

Authors:  Suresh E Joel; Brian S Caffo; Peter C M van Zijl; James J Pekar
Journal:  Magn Reson Med       Date:  2011-03-10       Impact factor: 4.668

4.  Neural processing correlates of assaultive violence exposure and PTSD symptoms during implicit threat processing: a network-level analysis among adolescent girls.

Authors:  Josh M Cisler; J Scott Steele; Sonet Smitherman; Jennifer K Lenow; Clinton D Kilts
Journal:  Psychiatry Res       Date:  2013-08-19       Impact factor: 3.222

5.  Spatiotemporal Segregation of Neural Response to Auditory Stimulation: An fMRI Study Using Independent Component Analysis and Frequency-Domain Analysis.

Authors:  Natalia Yakunina; Woo Suk Tae; Kang Uk Lee; Sam Soo Kim; Eui-Cheol Nam
Journal:  PLoS One       Date:  2013-06-18       Impact factor: 3.240

6.  Implicit emotion regulation in adolescent girls: An exploratory investigation of Hidden Markov Modeling and its neural correlates.

Authors:  James S Steele; Keith Bush; Zachary N Stowe; George A James; Sonet Smitherman; Clint D Kilts; Josh Cisler
Journal:  PLoS One       Date:  2018-02-28       Impact factor: 3.240

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.