Literature DB >> 10686114

Detection of consistently task-related activations in fMRI data with hybrid independent component analysis.

M J McKeown1.   

Abstract

fMRI data are commonly analyzed by testing the time course from each voxel against specific hypothesized waveforms, despite the fact that many components of fMRI signals are difficult to specify explicitly. In contrast, purely data-driven techniques, by focusing on the intrinsic structure of the data, lack a direct means to test hypotheses of interest to the examiner. Between these two extremes, there is a role for hybrid methods that use powerful data-driven techniques to fully characterize the data, but also use some a priori hypotheses to guide the analysis. Here we describe such a hybrid technique, HYBICA, which uses the initial characterization of the fMRI data from Independent Component Analysis and allows the experimenter to sequentially combine assumed task-related components so that one can gracefully navigate from a fully data-derived approach to a fully hypothesis-driven approach. We describe the results of testing the method with two artificial and two real data sets. A metric based on the diagnostic Predicted Sum of Squares statistic was used to select the best number of spatially independent components to combine and utilize in a standard regressional framework. The proposed metric provided an objective method to determine whether a more data-driven or a more hypothesis-driven approach was appropriate, depending on the degree of mismatch between the hypothesized reference function and the features in the data. HYBICA provides a robust way to combine the data-derived independent components into a data-derived activation waveform and suitable confounds so that standard statistical analysis can be performed. Copyright 2000 Academic Press.

Mesh:

Year:  2000        PMID: 10686114     DOI: 10.1006/nimg.1999.0518

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  45 in total

1.  Spatial and temporal independent component analysis of functional MRI data containing a pair of task-related waveforms.

Authors:  V D Calhoun; T Adali; G D Pearlson; J J Pekar
Journal:  Hum Brain Mapp       Date:  2001-05       Impact factor: 5.038

2.  Whole-brain functional MR imaging activation from a finger-tapping task examined with independent component analysis.

Authors:  C H Moritz; V M Haughton; D Cordes; M Quigley; M E Meyerand
Journal:  AJNR Am J Neuroradiol       Date:  2000-10       Impact factor: 3.825

3.  A method for making group inferences from functional MRI data using independent component analysis.

Authors:  V D Calhoun; T Adali; G D Pearlson; J J Pekar
Journal:  Hum Brain Mapp       Date:  2001-11       Impact factor: 5.038

4.  Modeling task-based fMRI data via deep belief network with neural architecture search.

Authors:  Ning Qiang; Qinglin Dong; Wei Zhang; Bao Ge; Fangfei Ge; Hongtao Liang; Yifei Sun; Jie Gao; Tianming Liu
Journal:  Comput Med Imaging Graph       Date:  2020-06-06       Impact factor: 4.790

5.  Power spectrum ranked independent component analysis of a periodic fMRI complex motor paradigm.

Authors:  Chad H Moritz; Baxter P Rogers; M Elizabeth Meyerand
Journal:  Hum Brain Mapp       Date:  2003-02       Impact factor: 5.038

6.  How does spatial extent of fMRI datasets affect independent component analysis decomposition?

Authors:  Adriana Aragri; Tommaso Scarabino; Erich Seifritz; Silvia Comani; Sossio Cirillo; Gioacchino Tedeschi; Fabrizio Esposito; Francesco Di Salle
Journal:  Hum Brain Mapp       Date:  2006-09       Impact factor: 5.038

Review 7.  The chronoarchitecture of the cerebral cortex.

Authors:  Andreas Bartels; Semir Zeki
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-04-29       Impact factor: 6.237

8.  Estimating the number of independent components for functional magnetic resonance imaging data.

Authors:  Yi-Ou Li; Tülay Adali; Vince D Calhoun
Journal:  Hum Brain Mapp       Date:  2007-11       Impact factor: 5.038

9.  Partner-matching for the automated identification of reproducible ICA components from fMRI datasets: algorithm and validation.

Authors:  Zhishun Wang; Bradley S Peterson
Journal:  Hum Brain Mapp       Date:  2008-08       Impact factor: 5.038

10.  Automatic independent component labeling for artifact removal in fMRI.

Authors:  Jussi Tohka; Karin Foerde; Adam R Aron; Sabrina M Tom; Arthur W Toga; Russell A Poldrack
Journal:  Neuroimage       Date:  2007-10-25       Impact factor: 6.556

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