Literature DB >> 19279706

Anxa4 Genes are Expressed in Distinct Organ Systems in Xenopus laevis and tropicalis But are Functionally Conserved.

Karine L Massé1, Robert J Collins, Surinder Bhamra, Rachel A Seville, Elizabeth A Jones.   

Abstract

Anxa4 belongs to the multigenic annexin family of proteins which are characterized by their ability to interact with membranes in a calcium-dependent manner. Defined as a marker for polarized epithelial cells, Anxa4 is believed to be involved in many cellular processes but its functions in vivo are still poorly understood. Previously, we cloned Xanx4 in Xenopus laevis (now referred to as anxa4a) and demonstrated its role during organogenesis of the pronephros, providing the first evidence of a specific function for this protein during the development of a vertebrate. Here, we describe the strict conservation of protein sequence and functional domains of anxa4 during vertebrate evolution. We also identify the paralog of anxa4a, anxa4b and show its specific temporal and spatial expression pattern is different from anxa4a. We show that anxa4 orthologs in X. laevis and tropicalis display expression domains in different organ systems. Whilst the anxa4a gene is mainly expressed in the kidney, Xt anxa4 is expressed in the liver. Finally, we demonstrate Xt anxa4 and anxa4a can display conserved function during kidney organogenesis, despite the fact that Xt anxa4 transcripts are not expressed in this domain. This study highlights the divergence of expression of homologous genes during Xenopus evolution and raises the potential problems of using X. tropicalis promoters in X. laevis.

Entities:  

Keywords:  Xenopus laevis; Xenopus tropicalis; annexin 4; evolution; kidney; liver; morpholino; organogenesis; paralog and ortholog

Year:  2007        PMID: 19279706      PMCID: PMC2649617          DOI: 10.4161/org.3.2.4945

Source DB:  PubMed          Journal:  Organogenesis        ISSN: 1547-6278            Impact factor:   2.500


  50 in total

Review 1.  Annexins and disease.

Authors:  Matthew J Hayes; Stephen E Moss
Journal:  Biochem Biophys Res Commun       Date:  2004-10-01       Impact factor: 3.575

Review 2.  Annexins: linking Ca2+ signalling to membrane dynamics.

Authors:  Volker Gerke; Carl E Creutz; Stephen E Moss
Journal:  Nat Rev Mol Cell Biol       Date:  2005-06       Impact factor: 94.444

3.  Techniques and probes for the study of Xenopus tropicalis development.

Authors:  Mustafa K Khokha; Christina Chung; Erika L Bustamante; Lisa W K Gaw; Kristin A Trott; Joanna Yeh; Nancy Lim; Jennifer C Y Lin; Nicola Taverner; Enrique Amaya; Nancy Papalopulu; James C Smith; Aaron M Zorn; Richard M Harland; Timothy C Grammer
Journal:  Dev Dyn       Date:  2002-12       Impact factor: 3.780

4.  Sequencing and analysis of 10,967 full-length cDNA clones from Xenopus laevis and Xenopus tropicalis reveals post-tetraploidization transcriptome remodeling.

Authors:  Ryan D Morin; Elbert Chang; Anca Petrescu; Nancy Liao; Malachi Griffith; William Chow; Robert Kirkpatrick; Yaron S Butterfield; Alice C Young; Jeffrey Stott; Sarah Barber; Ryan Babakaiff; Mark C Dickson; Corey Matsuo; David Wong; George S Yang; Duane E Smailus; Keith D Wetherby; Peggy N Kwong; Jane Grimwood; Charles P Brinkley; Mabel Brown-John; Natalie D Reddix-Dugue; Michael Mayo; Jeremy Schmutz; Jaclyn Beland; Morgan Park; Susan Gibson; Teika Olson; Gerard G Bouffard; Miranda Tsai; Ruth Featherstone; Steve Chand; Asim S Siddiqui; Wonhee Jang; Ed Lee; Steven L Klein; Robert W Blakesley; Barry R Zeeberg; Sudarshan Narasimhan; John N Weinstein; Christa Prange Pennacchio; Richard M Myers; Eric D Green; Lukas Wagner; Daniela S Gerhard; Marco A Marra; Steven J M Jones; Robert A Holt
Journal:  Genome Res       Date:  2006-05-03       Impact factor: 9.043

5.  Cloning and characterization of ZAP36, an annexin-like, zymogen granule membrane associated protein, in exocrine pancreas.

Authors:  Shin-Ichi Fukuoka; Horst Kern; Reiko Kazuki-Sugino; Yoshiki Ikeda
Journal:  Biochim Biophys Acta       Date:  2002-05-03

6.  Crystal structure of the annexin XII hexamer and implications for bilayer insertion.

Authors:  H Luecke; B T Chang; W S Mailliard; D D Schlaepfer; H T Haigler
Journal:  Nature       Date:  1995-11-30       Impact factor: 49.962

7.  Increased expression and altered location of annexin IV in renal clear cell carcinoma: a possible role in tumour dissemination.

Authors:  Uwe Zimmermann; Stefan Balabanov; Jürgen Giebel; Steffen Teller; Heike Junker; Dieter Schmoll; Chris Protzel; Christian Scharf; Britta Kleist; Reinhard Walther
Journal:  Cancer Lett       Date:  2004-06-08       Impact factor: 8.679

8.  Defining a large set of full-length clones from a Xenopus tropicalis EST project.

Authors:  Michael J Gilchrist; Aaron M Zorn; Jana Voigt; James C Smith; Nancy Papalopulu; Enrique Amaya
Journal:  Dev Biol       Date:  2004-07-15       Impact factor: 3.582

9.  The crystal structure and ion channel activity of human annexin II, a peripheral membrane protein.

Authors:  A Burger; R Berendes; S Liemann; J Benz; A Hofmann; P Göttig; R Huber; V Gerke; C Thiel; J Römisch; K Weber
Journal:  J Mol Biol       Date:  1996-04-12       Impact factor: 5.469

10.  XBF-1, a winged helix transcription factor with dual activity, has a role in positioning neurogenesis in Xenopus competent ectoderm.

Authors:  C Bourguignon; J Li; N Papalopulu
Journal:  Development       Date:  1998-12       Impact factor: 6.868

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  2 in total

1.  Identification of Annexin A4 as a hepatopancreas factor involved in liver cell survival.

Authors:  Danhua Zhang; Vladislav S Golubkov; Wenlong Han; Ricardo G Correa; Ying Zhou; Sunyoung Lee; Alex Y Strongin; P Duc Si Dong
Journal:  Dev Biol       Date:  2014-08-29       Impact factor: 3.582

2.  The transcription factor Ikaros inhibits cell proliferation by downregulating ANXA4 expression in hepatocellular carcinoma.

Authors:  Yi-Yao Liu; Chao Ge; Hua Tian; Jing-Yi Jiang; Fang-Yu Zhao; Hong Li; Tao-Yang Chen; Ming Yao; Jin-Jun Li
Journal:  Am J Cancer Res       Date:  2017-06-01       Impact factor: 6.166

  2 in total

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