Literature DB >> 19268651

Solid-state NMR and functional studies on proteorhodopsin.

Nicole Pfleger1, Andreas C Wörner, Jun Yang, Sarika Shastri, Ute A Hellmich, Lubica Aslimovska, Melanie S M Maier, Clemens Glaubitz.   

Abstract

Proteins of the proteorhodopsin (PR) family are found abundantly in many marine bacteria in the photic zone of the oceans. They are colour-tuned to their environment. The green absorbing species has been shown to act as a light-driven proton pump and thus could form a potential source of energy. The pK(a) of the primary proton acceptor is close to the pH of seawater which could also indicate a regulatory role. Here, we review and summarize our own recent findings in the context of known data and present some new results. Proton transfer in vitro by PR is shown by a fluorescence assay which confirms a pH dependent vectoriality. Previously reported low diffracting 2D crystal preparations of PR are assessed for their use for solid-state NMR by two dimensional (13)C-(13)C DARR spectra. (15)N-(1)H HETCOR MAS NMR experiments show bound water in the vicinity of the protonated Schiff base which could play a role in proton transfer. The effect of highly conserved H75 onto the properties of the chromophore has been investigated by single site mutations. They do show a pronounced effect onto the optical absorption maximum and the pK(a) of the proton acceptor but have only a small effect onto the (15)N chemical shifts of the protonated Schiff base.

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Year:  2009        PMID: 19268651     DOI: 10.1016/j.bbabio.2009.02.022

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  9 in total

Review 1.  Chemical shift tensor - the heart of NMR: Insights into biological aspects of proteins.

Authors:  Hazime Saitô; Isao Ando; Ayyalusamy Ramamoorthy
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05-07       Impact factor: 9.795

Review 2.  Membrane proteins in their native habitat as seen by solid-state NMR spectroscopy.

Authors:  Leonid S Brown; Vladimir Ladizhansky
Journal:  Protein Sci       Date:  2015-05-27       Impact factor: 6.725

3.  Photocycle-dependent conformational changes in the proteorhodopsin cross-protomer Asp-His-Trp triad revealed by DNP-enhanced MAS-NMR.

Authors:  Jakob Maciejko; Jagdeep Kaur; Johanna Becker-Baldus; Clemens Glaubitz
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-04       Impact factor: 11.205

4.  Supramolecular structure of membrane-associated polypeptides by combining solid-state NMR and molecular dynamics simulations.

Authors:  Markus Weingarth; Christian Ader; Adrien S J Melquiond; Deepak Nand; Olaf Pongs; Stefan Becker; Alexandre M J J Bonvin; Marc Baldus
Journal:  Biophys J       Date:  2012-07-03       Impact factor: 4.033

5.  Structural insight into proteorhodopsin oligomers.

Authors:  Katherine M Stone; Jeda Voska; Maia Kinnebrew; Anna Pavlova; Matthias J N Junk; Songi Han
Journal:  Biophys J       Date:  2013-01-22       Impact factor: 4.033

6.  Solution NMR structure of proteorhodopsin.

Authors:  Sina Reckel; Daniel Gottstein; Jochen Stehle; Frank Löhr; Mirka-Kristin Verhoefen; Mitsuhiro Takeda; Robert Silvers; Masatsune Kainosho; Clemens Glaubitz; Josef Wachtveitl; Frank Bernhard; Harald Schwalbe; Peter Güntert; Volker Dötsch
Journal:  Angew Chem Int Ed Engl       Date:  2011-10-27       Impact factor: 15.336

7.  Lipid bilayer composition can influence the orientation of proteorhodopsin in artificial membranes.

Authors:  Ramya Tunuguntla; Mangesh Bangar; Kyunghoon Kim; Pieter Stroeve; Caroline M Ajo-Franklin; Aleksandr Noy
Journal:  Biophys J       Date:  2013-09-17       Impact factor: 4.033

8.  Probing the photointermediates of light-driven sodium ion pump KR2 by DNP-enhanced solid-state NMR.

Authors:  Orawan Jakdetchai; Peter Eberhardt; Marvin Asido; Jagdeep Kaur; Clara Nassrin Kriebel; Jiafei Mao; Alexander J Leeder; Lynda J Brown; Richard C D Brown; Johanna Becker-Baldus; Christian Bamann; Josef Wachtveitl; Clemens Glaubitz
Journal:  Sci Adv       Date:  2021-03-12       Impact factor: 14.136

9.  Cotranslational recruitment of ribosomes in protocells recreates a translocon-independent mechanism of proteorhodopsin biogenesis.

Authors:  Ross Eaglesfield; Mary Ann Madsen; Suparna Sanyal; Julien Reboud; Anna Amtmann
Journal:  iScience       Date:  2021-04-20
  9 in total

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