Literature DB >> 19259117

Systems and Synthetic biology: tackling genetic networks and complex diseases.

G Cuccato1, G Della Gatta, D di Bernardo.   

Abstract

In the era of post-genomic research two new disciplines, Systems and Synthetic biology, act in a complementary way to shed light on the ever-increasing amount of data produced by novel high-throughput techniques. Systems biology aims at developing a formal understanding of biological processes through the development of quantitative mathematical models (bottom-up approach) and of 'reverse engineering' (top-down approach), whose aim is to infer the interactions among genes and proteins from experimental observations (gene regulatory networks). Synthetic biology on the other hand uses mathematical models to design novel biological 'circuits' (synthetic networks) able to perform specific tasks (for example, periodic expression of a gene of interest), or able to change the behavior of a biological process in a desired way (for example, modify metabolism to produce a specific compound of interest). The use of a pioneering approach that combines biology and engineering, to describe and/or invent new behaviors, could represent a valuable resource for studying complex diseases and design novel therapies. The identification of regulatory networks will help in identifying hundreds of genes that are responsible for most genetic diseases and that could serve as a starting point for therapeutic intervention. Here we present some of the main genetics and medical applications of these two emerging fields.

Entities:  

Mesh:

Year:  2009        PMID: 19259117     DOI: 10.1038/hdy.2009.18

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  13 in total

1.  Synthetic biology for translational research.

Authors:  Peter D Burbelo; Kathryn H Ching; Brian L Han; Caitlin M Klimavicz; Michael J Iadarola
Journal:  Am J Transl Res       Date:  2010-07-20       Impact factor: 4.060

Review 2.  Network inference and network response identification: moving genome-scale data to the next level of biological discovery.

Authors:  Diogo F T Veiga; Bhaskar Dutta; Gábor Balázsi
Journal:  Mol Biosyst       Date:  2009-12-11

3.  Predicting synthetic gene networks.

Authors:  Diego di Bernardo; Lucia Marucci; Filippo Menolascina; Velia Siciliano
Journal:  Methods Mol Biol       Date:  2012

4.  How to turn a genetic circuit into a synthetic tunable oscillator, or a bistable switch.

Authors:  Lucia Marucci; David A W Barton; Irene Cantone; Maria Aurelia Ricci; Maria Pia Cosma; Stefania Santini; Diego di Bernardo; Mario di Bernardo
Journal:  PLoS One       Date:  2009-12-07       Impact factor: 3.240

5.  Statecharts for gene network modeling.

Authors:  Yong-Jun Shin; Mehrdad Nourani
Journal:  PLoS One       Date:  2010-02-23       Impact factor: 3.240

6.  Integrated cellular network of transcription regulations and protein-protein interactions.

Authors:  Yu-Chao Wang; Bor-Sen Chen
Journal:  BMC Syst Biol       Date:  2010-03-08

7.  DNA-protein π-interactions in nature: abundance, structure, composition and strength of contacts between aromatic amino acids and DNA nucleobases or deoxyribose sugar.

Authors:  Katie A Wilson; Jennifer L Kellie; Stacey D Wetmore
Journal:  Nucleic Acids Res       Date:  2014-04-17       Impact factor: 16.971

8.  A conceptual review on systems biology in health and diseases: from biological networks to modern therapeutics.

Authors:  Pramod Rajaram Somvanshi; K V Venkatesh
Journal:  Syst Synth Biol       Date:  2013-09-18

9.  Global screening of potential Candida albicans biofilm-related transcription factors via network comparison.

Authors:  Yu-Chao Wang; Chung-Yu Lan; Wen-Ping Hsieh; Luis A Murillo; Nina Agabian; Bor-Sen Chen
Journal:  BMC Bioinformatics       Date:  2010-01-26       Impact factor: 3.169

10.  Toward theoretical synthesis of biocomputer.

Authors:  Ting-Yu Kuo; Chun-Liang Lin; Natdanai Charoenkit; Yang-Yi Chen; Chakkrit Preuksakarn
Journal:  IET Syst Biol       Date:  2017-02       Impact factor: 1.615

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.