Literature DB >> 19258530

How the microbial world saved evolution from the scylla of molecular biology and the charybdis of the modern synthesis.

Carl R Woese1, Nigel Goldenfeld.   

Abstract

In this commentary, we provide a personal overview of the conceptual history of microbiology and molecular biology over the course of the last hundred years, emphasizing the relationship of these fields to the problem of evolution. We argue that despite their apparent success, all three reached an impasse that arose from the influence of dogmatic or overly narrow perspectives. Finally, we describe how recent developments in microbiology are realizing Beijerinck's vision of a field that is fully integrated with molecular biology, microbial ecology, thereby challenging and extending current thinking in evolution.

Mesh:

Year:  2009        PMID: 19258530      PMCID: PMC2650883          DOI: 10.1128/MMBR.00002-09

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  29 in total

1.  On the mechanism of the development of multiple-drug-resistant clones of Shigella.

Authors:  T AKIBA; K KOYAMA; Y ISHIKI; S KIMURA; T FUKUSHIMA
Journal:  Jpn J Microbiol       Date:  1960-04

2.  Molecular structure of nucleic acids; a structure for deoxyribose nucleic acid.

Authors:  J D WATSON; F H CRICK
Journal:  Nature       Date:  1953-04-25       Impact factor: 49.962

3.  Gene recombination in Escherichia coli.

Authors:  J LEDERBERG; E L TATUM
Journal:  Nature       Date:  1946-10-19       Impact factor: 49.962

4.  Massive horizontal gene transfer in bdelloid rotifers.

Authors:  Eugene A Gladyshev; Matthew Meselson; Irina R Arkhipova
Journal:  Science       Date:  2008-05-30       Impact factor: 47.728

5.  STUDIES ON THE CHEMICAL NATURE OF THE SUBSTANCE INDUCING TRANSFORMATION OF PNEUMOCOCCAL TYPES : INDUCTION OF TRANSFORMATION BY A DESOXYRIBONUCLEIC ACID FRACTION ISOLATED FROM PNEUMOCOCCUS TYPE III.

Authors:  O T Avery; C M Macleod; M McCarty
Journal:  J Exp Med       Date:  1944-02-01       Impact factor: 14.307

6.  Cross-species gene transfer; implications for a new theory of evolution.

Authors:  M Syvanen
Journal:  J Theor Biol       Date:  1985-01-21       Impact factor: 2.691

7.  Phylogenetic structure of the prokaryotic domain: the primary kingdoms.

Authors:  C R Woese; G E Fox
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

8.  Forty years of genetic recombination in bacteria. Postmature scientific discovery?

Authors:  H Zuckerman; J Lederberg
Journal:  Nature       Date:  1986 Dec 18-31       Impact factor: 49.962

9.  Widespread lateral gene transfer from intracellular bacteria to multicellular eukaryotes.

Authors:  Julie C Dunning Hotopp; Michael E Clark; Deodoro C S G Oliveira; Jeremy M Foster; Peter Fischer; Mónica C Muñoz Torres; Jonathan D Giebel; Nikhil Kumar; Nadeeza Ishmael; Shiliang Wang; Jessica Ingram; Rahul V Nene; Jessica Shepard; Jeffrey Tomkins; Stephen Richards; David J Spiro; Elodie Ghedin; Barton E Slatko; Hervé Tettelin; John H Werren
Journal:  Science       Date:  2007-08-30       Impact factor: 47.728

10.  Prevalence and evolution of core photosystem II genes in marine cyanobacterial viruses and their hosts.

Authors:  Matthew B Sullivan; Debbie Lindell; Jessica A Lee; Luke R Thompson; Joseph P Bielawski; Sallie W Chisholm
Journal:  PLoS Biol       Date:  2006-07       Impact factor: 8.029

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  28 in total

Review 1.  Archaea--timeline of the third domain.

Authors:  Ricardo Cavicchioli
Journal:  Nat Rev Microbiol       Date:  2010-12-06       Impact factor: 60.633

Review 2.  Neo-Darwinism, the modern synthesis and selfish genes: are they of use in physiology?

Authors:  Denis Noble
Journal:  J Physiol       Date:  2010-12-06       Impact factor: 5.182

3.  Ecosystem-specific selection pressures revealed through comparative population genomics.

Authors:  Maureen L Coleman; Sallie W Chisholm
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-11       Impact factor: 11.205

4.  Toward an evolutionary-predictive foundation for creativity : Commentary on "Human creativity, evolutionary algorithms, and predictive representations: The mechanics of thought trials" by Arne Dietrich and Hilde Haider, 2014 (Accepted pending minor revisions for publication in Psychonomic Bulletin & Review).

Authors:  Liane Gabora; Stuart Kauffman
Journal:  Psychon Bull Rev       Date:  2016-04

5.  Remembering Our Forebears: Albert Jan Kluyver and the Unity of Life.

Authors:  Rivers Singleton; David R Singleton
Journal:  J Hist Biol       Date:  2017-02       Impact factor: 1.326

6.  Central role of the cell in microbial ecology.

Authors:  Karsten Zengler
Journal:  Microbiol Mol Biol Rev       Date:  2009-12       Impact factor: 11.056

7.  The Origin at 150: is a new evolutionary synthesis in sight?

Authors:  Eugene V Koonin
Journal:  Trends Genet       Date:  2009-10-14       Impact factor: 11.639

Review 8.  Deep phylogeny--how a tree can help characterize early life on Earth.

Authors:  Eric A Gaucher; James T Kratzer; Ryan N Randall
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-01       Impact factor: 10.005

Review 9.  From water and ions to crowded biomacromolecules: in vivo structuring of a prokaryotic cell.

Authors:  Jan Spitzer
Journal:  Microbiol Mol Biol Rev       Date:  2011-09       Impact factor: 11.056

Review 10.  The eukaryotic cell originated in the integration and redistribution of hyperstructures from communities of prokaryotic cells based on molecular complementarity.

Authors:  Vic Norris; Robert Root-Bernstein
Journal:  Int J Mol Sci       Date:  2009-06-04       Impact factor: 6.208

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