Literature DB >> 19234543

Forces and torques in the nucleus: chromatin under mechanical constraints.

Christophe Lavelle1.   

Abstract

Genomic DNA in eukaryotic cells is organized in discrete chromosome territories, each consisting of a single huge hierarchically supercoiled nucleosomal fiber. Through dynamic changes in structure, resulting from chemical modifications and mechanical constraints imposed by numerous factors in vivo, chromatin plays a critical role in the regulation of DNA metabolism processes, including replication and transcription. Indeed, DNA-translocating enzymes, such as polymerases, produce physical constraints that chromatin has to overcome. Recent techniques, in particular single-molecule micromanipulation, have allowed precise quantization of forces and torques at work in the nucleus and have greatly improved our understanding of chromatin behavior under physiological mechanical constraints. These new biophysical approaches should enable us to build realistic mechanistic models and progressively specify the ad hoc and hazy "because of chromatin structure" argument often used to interpret experimental studies of biological function in the context of chromatin.

Mesh:

Substances:

Year:  2009        PMID: 19234543     DOI: 10.1139/O08-123

Source DB:  PubMed          Journal:  Biochem Cell Biol        ISSN: 0829-8211            Impact factor:   3.626


  17 in total

1.  Nucleosome assembly depends on the torsion in the DNA molecule: a magnetic tweezers study.

Authors:  Pooja Gupta; Jordanka Zlatanova; Miroslav Tomschik
Journal:  Biophys J       Date:  2009-12-16       Impact factor: 4.033

2.  Linker histones incorporation maintains chromatin fiber plasticity.

Authors:  Pierre Recouvreux; Christophe Lavelle; Maria Barbi; Natalia Conde E Silva; Eric Le Cam; Jean-Marc Victor; Jean-Louis Viovy
Journal:  Biophys J       Date:  2011-06-08       Impact factor: 4.033

3.  PR65, the HEAT-repeat scaffold of phosphatase PP2A, is an elastic connector that links force and catalysis.

Authors:  Alison Grinthal; Ivana Adamovic; Beth Weiner; Martin Karplus; Nancy Kleckner
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-25       Impact factor: 11.205

Review 4.  Inching over hurdles: how DNA helicases move on crowded lattices.

Authors:  Maria Spies; Taekjip Ha
Journal:  Cell Cycle       Date:  2010-05-06       Impact factor: 4.534

Review 5.  DNA topology and transcription.

Authors:  Fedor Kouzine; David Levens; Laura Baranello
Journal:  Nucleus       Date:  2014-04-22       Impact factor: 4.197

6.  A method to estimate the elastic energy stored in braided DNA molecules using hydrodynamic equations.

Authors:  Mónica Fernández-Sierra; Violeta Delgado-Martí; Jorge E Colón-García; Edwin Quiñones
Journal:  Chem Phys       Date:  2011-05-26       Impact factor: 2.348

Review 7.  The importance of being supercoiled: how DNA mechanics regulate dynamic processes.

Authors:  Laura Baranello; David Levens; Ashutosh Gupta; Fedor Kouzine
Journal:  Biochim Biophys Acta       Date:  2012-01-03

Review 8.  Chromatin fiber dynamics under tension and torsion.

Authors:  Christophe Lavelle; Jean-Marc Victor; Jordanka Zlatanova
Journal:  Int J Mol Sci       Date:  2010-04-12       Impact factor: 5.923

Review 9.  Cellular MYCro economics: Balancing MYC function with MYC expression.

Authors:  David Levens
Journal:  Cold Spring Harb Perspect Med       Date:  2013-11-01       Impact factor: 6.915

10.  DDX5 helicase resolves G-quadruplex and is involved in MYC gene transcriptional activation.

Authors:  Guanhui Wu; Zheng Xing; Elizabeth J Tran; Danzhou Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-23       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.