Literature DB >> 19228069

When starting over makes more sense.

Scott C Blanchard1.   

Abstract

Proofreading mechanisms intrinsic to DNA and RNA polymers that contribute substantially to overall fidelity are lacking in the ribosome. New evidence, however, suggests that quality control in translation can occur after substrate incorporation by an abortive mechanism entailing premature release factor-catalyzed termination. These data shed new light on the importance and ubiquity of retrospective quality control mechanisms in ensuring the overall fidelity of nature's processive enzymes and demonstrate that competitive elongation reactions on the ribosome are kinetically sensitive to compositional features of the translating particle.

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Year:  2009        PMID: 19228069      PMCID: PMC3433159          DOI: 10.1021/cb900030w

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  15 in total

1.  Understanding discrimination by the ribosome: stability testing and groove measurement of codon-anticodon pairs.

Authors:  K Y Sanbonmatsu; S Joseph
Journal:  J Mol Biol       Date:  2003-04-18       Impact factor: 5.469

Review 2.  The single-nucleotide addition cycle in transcription: a biophysical and biochemical perspective.

Authors:  D A Erie; T D Yager; P H von Hippel
Journal:  Annu Rev Biophys Biomol Struct       Date:  1992

3.  Substrate-assisted catalysis of peptide bond formation by the ribosome.

Authors:  Joshua S Weinger; K Mark Parnell; Silke Dorner; Rachel Green; Scott A Strobel
Journal:  Nat Struct Mol Biol       Date:  2004-10-10       Impact factor: 15.369

4.  The process of mRNA-tRNA translocation.

Authors:  Joachim Frank; Haixiao Gao; Jayati Sengupta; Ning Gao; Derek J Taylor
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-14       Impact factor: 11.205

Review 5.  Conformational coupling in DNA polymerase fidelity.

Authors:  K A Johnson
Journal:  Annu Rev Biochem       Date:  1993       Impact factor: 23.643

Review 6.  Recognition and selection of tRNA in translation.

Authors:  Marina V Rodnina; Kirill B Gromadski; Ute Kothe; Hans-Joachim Wieden
Journal:  FEBS Lett       Date:  2005-02-07       Impact factor: 4.124

7.  Quality control by the ribosome following peptide bond formation.

Authors:  Hani S Zaher; Rachel Green
Journal:  Nature       Date:  2008-12-17       Impact factor: 49.962

8.  Dissociation rates of peptidyl-tRNA from the P-site of E.coli ribosomes.

Authors:  R Karimi; M Ehrenberg
Journal:  EMBO J       Date:  1996-03-01       Impact factor: 11.598

9.  Structure of the 70S ribosome complexed with mRNA and tRNA.

Authors:  Maria Selmer; Christine M Dunham; Frank V Murphy; Albert Weixlbaumer; Sabine Petry; Ann C Kelley; John R Weir; V Ramakrishnan
Journal:  Science       Date:  2006-09-07       Impact factor: 47.728

10.  Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.

Authors:  Sabine Petry; Ditlev E Brodersen; Frank V Murphy; Christine M Dunham; Maria Selmer; Michael J Tarry; Ann C Kelley; V Ramakrishnan
Journal:  Cell       Date:  2005-12-29       Impact factor: 41.582

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