Literature DB >> 19218213

Crystallographic structure of the alpha-helical triple coiled-coil domain of avian reovirus S1133 fibre.

Pablo Guardado-Calvo1, Gavin C Fox2, Antonio L Llamas-Saiz3, Mark J van Raaij4,1.   

Abstract

Avian reovirus fibre, a homo-trimer of the sigmaC protein, is a minor component of the avian reovirus outer capsid. It is anchored via a short N-terminal sequence to the inner capsid lambdaC pentamer, and its protruding globular C-terminal domain is responsible for primary host cell attachment. We have previously solved the structure of a receptor-binding fragment in which residues 160-191 form a triple beta-spiral and 196-326 a beta-barrel head domain. Here we have expressed, purified and crystallized a major sigmaC fragment comprising residues 117-326. Its structure, which was solved by molecular replacement using the previously determined receptor-binding domain structure and refined to 1.75 A (0.175 nm) resolution, reveals an alpha-helical triple coiled-coil connected to the previously solved structure by a zinc-ion-containing linker. The coiled-coil domain contains two chloride ion binding sites, as well as specific trimerization and registration sequences. The linker may act as a functionally important hinge.

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Year:  2009        PMID: 19218213     DOI: 10.1099/vir.0.008276-0

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


  12 in total

1.  Structure of the receptor-binding carboxy-terminal domain of bacteriophage T7 tail fibers.

Authors:  Carmela Garcia-Doval; Mark J van Raaij
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-29       Impact factor: 11.205

2.  Exploring the atomic structure and conformational flexibility of a 320 Å long engineered viral fiber using X-ray crystallography.

Authors:  Anshul Bhardwaj; Sherwood R Casjens; Gino Cingolani
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2014-01-29

3.  Atomic structure of Cucumber necrosis virus and the role of the capsid in vector transmission.

Authors:  Ming Li; Kishore Kakani; Umesh Katpally; Sharnice Johnson; D'Ann Rochon; Thomas J Smith
Journal:  J Virol       Date:  2013-09-04       Impact factor: 5.103

4.  Avian reovirus microNS protein forms homo-oligomeric inclusions in a microtubule-independent fashion, which involves specific regions of its C-terminal domain.

Authors:  Alberto Brandariz-Nuñez; Rebeca Menaya-Vargas; Javier Benavente; Jose Martinez-Costas
Journal:  J Virol       Date:  2010-02-24       Impact factor: 5.103

5.  Grass carp reovirus-GD108 fiber protein is involved in cell attachment.

Authors:  Yuanyuan Tian; Zhenzhen Jiao; Junjian Dong; Chengfei Sun; Xiaoyan Jiang; Xing Ye
Journal:  Virus Genes       Date:  2017-05-26       Impact factor: 2.332

6.  Structural and Functional Features of the Reovirus σ1 Tail.

Authors:  Melanie H Dietrich; Kristen M Ogden; Jacob M Long; Rebecca Ebenhoch; Alexandra Thor; Terence S Dermody; Thilo Stehle
Journal:  J Virol       Date:  2018-06-29       Impact factor: 5.103

7.  A coiled-coil motif that sequesters ions to the hydrophobic core.

Authors:  Marcus D Hartmann; Oswin Ridderbusch; Kornelius Zeth; Reinhard Albrecht; Oli Testa; Derek N Woolfson; Guido Sauer; Stanislaw Dunin-Horkawicz; Andrei N Lupas; Birte Hernandez Alvarez
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-23       Impact factor: 11.205

8.  Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions.

Authors:  Jaina Mistry; Robert D Finn; Sean R Eddy; Alex Bateman; Marco Punta
Journal:  Nucleic Acids Res       Date:  2013-04-17       Impact factor: 16.971

9.  Bioinformatics of recent aqua- and orthoreovirus isolates from fish: evolutionary gain or loss of FAST and fiber proteins and taxonomic implications.

Authors:  Max L Nibert; Roy Duncan
Journal:  PLoS One       Date:  2013-07-04       Impact factor: 3.240

10.  Crystal structure of the fibre head domain of the Atadenovirus Snake Adenovirus 1.

Authors:  Abhimanyu K Singh; Rosa Menéndez-Conejero; Carmen San Martín; Mark J van Raaij
Journal:  PLoS One       Date:  2014-12-08       Impact factor: 3.240

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