Literature DB >> 19217387

The nucleosome family: dynamic and growing.

Jordanka Zlatanova1, Thomas C Bishop, Jean-Marc Victor, Vaughn Jackson, Ken van Holde.   

Abstract

Ever since the discovery of the nucleosome in 1974, scientists have stumbled upon discrete particles in which DNA is wrapped around histone complexes of different stoichiometries: octasomes, hexasomes, tetrasomes, "split" half-nucleosomes, and, recently, bona fide hemisomes. Do all these particles exist in vivo? Under what conditions? What is their physiological significance in the complex DNA transactions in the eukaryotic nucleus? What are their dynamics? This review summarizes research spanning more than three decades and provides a new meaning to the term "nucleosome." The nucleosome can no longer be viewed as a single static entity: rather, it is a family of particles differing in their structural and dynamic properties, leading to different functionalities.

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Year:  2009        PMID: 19217387     DOI: 10.1016/j.str.2008.12.016

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  68 in total

Review 1.  The epigenetics of autoimmunity.

Authors:  Francesca Meda; Marco Folci; Andrea Baccarelli; Carlo Selmi
Journal:  Cell Mol Immunol       Date:  2011-01-31       Impact factor: 11.530

2.  How are nucleosomes disrupted during transcription elongation?

Authors:  Jordanka Zlatanova; Jean-Marc Victor
Journal:  HFSP J       Date:  2009-11-12

3.  Nanotribology results show that DNA forms a mechanically resistant 2D network in metaphase chromatin plates.

Authors:  Isaac Gállego; Gerard Oncins; Xavier Sisquella; Xavier Fernàndez-Busquets; Joan-Ramon Daban
Journal:  Biophys J       Date:  2010-12-15       Impact factor: 4.033

4.  A lattice model for transcription factor access to nucleosomal DNA.

Authors:  Vladimir B Teif; Ramona Ettig; Karsten Rippe
Journal:  Biophys J       Date:  2010-10-20       Impact factor: 4.033

Review 5.  New insights into nucleosome and chromatin structure: an ordered state or a disordered affair?

Authors:  Karolin Luger; Mekonnen L Dechassa; David J Tremethick
Journal:  Nat Rev Mol Cell Biol       Date:  2012-06-22       Impact factor: 94.444

6.  Nucleosome Core Particle Disassembly and Assembly Kinetics Studied Using Single-Molecule Fluorescence.

Authors:  Noa Plavner Hazan; Toma E Tomov; Roman Tsukanov; Miran Liber; Yaron Berger; Rula Masoud; Katalin Toth; Joerg Langowski; Eyal Nir
Journal:  Biophys J       Date:  2015-10-20       Impact factor: 4.033

7.  Rotational dynamics of DNA on the nucleosome surface markedly impact accessibility to a DNA repair enzyme.

Authors:  John M Hinz; Yesenia Rodriguez; Michael J Smerdon
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-22       Impact factor: 11.205

8.  Double-stranded DNA binding domain of poly(ADP-ribose) polymerase-1 and molecular insight into the regulation of its activity.

Authors:  Orlando Huambachano; Fatima Herrera; Ann Rancourt; Masahiko S Satoh
Journal:  J Biol Chem       Date:  2010-12-23       Impact factor: 5.157

9.  Nucleosome assembly depends on the torsion in the DNA molecule: a magnetic tweezers study.

Authors:  Pooja Gupta; Jordanka Zlatanova; Miroslav Tomschik
Journal:  Biophys J       Date:  2009-12-16       Impact factor: 4.033

10.  Subnucleosomal structures and nucleosome asymmetry across a genome.

Authors:  Ho Sung Rhee; Alain R Bataille; Liye Zhang; B Franklin Pugh
Journal:  Cell       Date:  2014-12-04       Impact factor: 41.582

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