Literature DB >> 19217343

Revisiting the modularity of modular polyketide synthases.

Chaitan Khosla1, Shiven Kapur, David E Cane.   

Abstract

Modularity is a highly sought after feature in engineering design. A modular catalyst is a multi-component system whose parts can be predictably interchanged for functional flexibility and variety. Nearly two decades after the discovery of the first modular polyketide synthase (PKS), we critically assess PKS modularity in the face of a growing body of atomic structural and in vitro biochemical investigations. Both the architectural modularity and the functional modularity of this family of enzymatic assembly lines are reviewed, and the fundamental challenges that lie ahead for the rational exploitation of their full biosynthetic potential are discussed.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19217343      PMCID: PMC2737389          DOI: 10.1016/j.cbpa.2008.12.018

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  36 in total

1.  Solution structure and backbone dynamics of the holo form of the frenolicin acyl carrier protein.

Authors:  Qing Li; Chaitan Khosla; Joseph D Puglisi; Corey W Liu
Journal:  Biochemistry       Date:  2003-04-29       Impact factor: 3.162

2.  Understanding substrate specificity of polyketide synthase modules by generating hybrid multimodular synthases.

Authors:  Kenji Watanabe; Clay C C Wang; Christopher N Boddy; David E Cane; Chaitan Khosla
Journal:  J Biol Chem       Date:  2003-08-15       Impact factor: 5.157

3.  A hybrid modular polyketide synthase obtained by domain swapping.

Authors:  M Oliynyk; M J Brown; J Cortés; J Staunton; P F Leadlay
Journal:  Chem Biol       Date:  1996-10

4.  Biochemical analysis of the substrate specificity of the beta-ketoacyl-acyl carrier protein synthase domain of module 2 of the erythromycin polyketide synthase.

Authors:  Jiaquan Wu; Kenji Kinoshita; Chaitan Khosla; David E Cane
Journal:  Biochemistry       Date:  2004-12-28       Impact factor: 3.162

5.  The structure of a ketoreductase determines the organization of the beta-carbon processing enzymes of modular polyketide synthases.

Authors:  Adrian T Keatinge-Clay; Robert M Stroud
Journal:  Structure       Date:  2006-03-23       Impact factor: 5.006

6.  Molecular basis of Celmer's rules: stereochemistry of catalysis by isolated ketoreductase domains from modular polyketide synthases.

Authors:  Alexandros P Siskos; Abel Baerga-Ortiz; Shilpa Bali; Viktor Stein; Hassan Mamdani; Dieter Spiteller; Bojana Popovic; Jonathan B Spencer; James Staunton; Kira J Weissman; Peter F Leadlay
Journal:  Chem Biol       Date:  2005-10

Review 7.  Modular phospholane ligands in asymmetric catalysis.

Authors:  M J Burk
Journal:  Acc Chem Res       Date:  2000-06       Impact factor: 22.384

8.  Solution structure and dynamics of oxytetracycline polyketide synthase acyl carrier protein from Streptomyces rimosus.

Authors:  Stuart C Findlow; Claire Winsor; Thomas J Simpson; John Crosby; Matthew P Crump
Journal:  Biochemistry       Date:  2003-07-22       Impact factor: 3.162

9.  Solution structure and proposed domain domain recognition interface of an acyl carrier protein domain from a modular polyketide synthase.

Authors:  Viktor Y Alekseyev; Corey W Liu; David E Cane; Joseph D Puglisi; Chaitan Khosla
Journal:  Protein Sci       Date:  2007-10       Impact factor: 6.725

10.  Key residues responsible for acyl carrier protein and beta-ketoacyl-acyl carrier protein reductase (FabG) interaction.

Authors:  Yong-Mei Zhang; Bainan Wu; Jie Zheng; Charles O Rock
Journal:  J Biol Chem       Date:  2003-10-03       Impact factor: 5.157

View more
  40 in total

1.  Reprogramming a module of the 6-deoxyerythronolide B synthase for iterative chain elongation.

Authors:  Shiven Kapur; Brian Lowry; Satoshi Yuzawa; Sanketha Kenthirapalan; Alice Y Chen; David E Cane; Chaitan Khosla
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-27       Impact factor: 11.205

Review 2.  Programming of erythromycin biosynthesis by a modular polyketide synthase.

Authors:  David E Cane
Journal:  J Biol Chem       Date:  2010-06-03       Impact factor: 5.157

3.  A novel docking domain interface model predicting recombination between homoeologous modular biosynthetic gene clusters.

Authors:  Antonio Starcevic; Janko Diminic; Jurica Zucko; Mouhsine Elbekali; Tobias Schlosser; Mohamed Lisfi; Ana Vukelic; Paul F Long; Daslav Hranueli; John Cullum
Journal:  J Ind Microbiol Biotechnol       Date:  2010-11-24       Impact factor: 3.346

4.  Probing the modularity of megasynthases by rational engineering of a fatty acid synthase Type I.

Authors:  Alexander Rittner; Karthik S Paithankar; David Jan Drexler; Aaron Himmler; Martin Grininger
Journal:  Protein Sci       Date:  2018-12-20       Impact factor: 6.725

Review 5.  Protein engineering towards natural product synthesis and diversification.

Authors:  Angelica O Zabala; Ralph A Cacho; Yi Tang
Journal:  J Ind Microbiol Biotechnol       Date:  2011-10-18       Impact factor: 3.346

Review 6.  Nonproteinogenic amino acid building blocks for nonribosomal peptide and hybrid polyketide scaffolds.

Authors:  Christopher T Walsh; Robert V O'Brien; Chaitan Khosla
Journal:  Angew Chem Int Ed Engl       Date:  2013-05-31       Impact factor: 15.336

Review 7.  Structural insights into nonribosomal peptide enzymatic assembly lines.

Authors:  Alexander Koglin; Christopher T Walsh
Journal:  Nat Prod Rep       Date:  2009-05-22       Impact factor: 13.423

8.  Stereochemistry of reductions catalyzed by methyl-epimerizing ketoreductase domains of polyketide synthases.

Authors:  Young-Ok You; Chaitan Khosla; David E Cane
Journal:  J Am Chem Soc       Date:  2013-05-13       Impact factor: 15.419

9.  Vinylogous chain branching catalysed by a dedicated polyketide synthase module.

Authors:  Tom Bretschneider; Joel B Heim; Daniel Heine; Robert Winkler; Benjamin Busch; Björn Kusebauch; Thilo Stehle; Georg Zocher; Christian Hertweck
Journal:  Nature       Date:  2013-09-18       Impact factor: 49.962

10.  Spliceostatin hemiketal biosynthesis in Burkholderia spp. is catalyzed by an iron/α-ketoglutarate-dependent dioxygenase.

Authors:  Alessandra S Eustáquio; Jeffrey E Janso; Anokha S Ratnayake; Christopher J O'Donnell; Frank E Koehn
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-05       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.