Literature DB >> 19177345

Sorting the chaff from the wheat at the PDB.

Dale E Tronrud1, Brian W Matthews.   

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Year:  2009        PMID： 19177345      PMCID： PMC2708036          DOI： 10.1002/pro.13

Source DB:  PubMed          Journal:  Protein Sci        ISSN： 0961-8368            Impact factor:   6.725


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  33 in total

Review 1.  Validation of protein crystal structures.

Authors:  G J Kleywegt
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-03

2.  The structure of 6-phosphogluconate dehydrogenase refined at 2.5 A resolution.

Authors:  M J Adams; S Gover; R Leaback; C Phillips; D O Somers
Journal:  Acta Crystallogr B       Date:  1991-10-01

3.  Storing diffraction data.

Authors:  T A Jones; G J Kleywegt; A T Brunger
Journal:  Nature       Date:  1996-09-05       Impact factor: 49.962

4.  Crystal structure of enolase indicates that enolase and pyruvate kinase evolved from a common ancestor.

Authors:  L Lebioda; B Stec
Journal:  Nature       Date:  1988-06-16       Impact factor: 49.962

5.  Crystallographic structure of the octameric histone core of the nucleosome at a resolution of 3.3 A.

Authors:  R W Burlingame; W E Love; B C Wang; R Hamlin; H X Nguyen; E N Moudrianakis
Journal:  Science       Date:  1985-05-03       Impact factor: 47.728

6.  The octameric histone core of the nucleosome. Structural issues resolved.

Authors:  B C Wang; J Rose; G Arents; E N Moudrianakis
Journal:  J Mol Biol       Date:  1994-02-11       Impact factor: 5.469

7.  Structure of the gene V protein of bacteriophage f1 determined by multiwavelength x-ray diffraction on the selenomethionyl protein.

Authors:  M M Skinner; H Zhang; D H Leschnitzer; Y Guan; H Bellamy; R M Sweet; C W Gray; R N Konings; A H Wang; T C Terwilliger
Journal:  Proc Natl Acad Sci U S A       Date:  1994-03-15       Impact factor: 11.205

8.  Structure of the DNA-Eco RI endonuclease recognition complex at 3 A resolution.

Authors:  J A McClarin; C A Frederick; B C Wang; P Greene; H W Boyer; J Grable; J M Rosenberg
Journal:  Science       Date:  1986-12-19       Impact factor: 47.728

9.  The 2.0-A resolution structure of Escherichia coli histidine-containing phosphocarrier protein HPr. A redetermination.

Authors:  Z Jia; J W Quail; E B Waygood; L T Delbaere
Journal:  J Biol Chem       Date:  1993-10-25       Impact factor: 5.157

10.  The three dimensional structure of sheep liver 6-phosphogluconate dehydrogenase at 2.6 A resolution.

Authors:  M J Adams; I G Archibald; C E Bugg; A Carne; S Gover; J R Helliwell; R W Pickersgill; S W White
Journal:  EMBO J       Date:  1983       Impact factor: 11.598
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  4 in total

1.  RosettaHoles2: a volumetric packing measure for protein structure refinement and validation.

Authors:  William Sheffler; David Baker
Journal:  Protein Sci       Date:  2010-10       Impact factor: 6.725

Review 2.  Crystallographic model validation: from diagnosis to healing.

Authors:  Jane S Richardson; Michael G Prisant; David C Richardson
Journal:  Curr Opin Struct Biol       Date:  2013-09-21       Impact factor: 6.809

3.  A score of the ability of a three-dimensional protein model to retrieve its own sequence as a quantitative measure of its quality and appropriateness.

Authors:  León P Martínez-Castilla; Rogelio Rodríguez-Sotres
Journal:  PLoS One       Date:  2010-09-07       Impact factor: 3.240

4.  A new generation of crystallographic validation tools for the protein data bank.

Authors:  Randy J Read; Paul D Adams; W Bryan Arendall; Axel T Brunger; Paul Emsley; Robbie P Joosten; Gerard J Kleywegt; Eugene B Krissinel; Thomas Lütteke; Zbyszek Otwinowski; Anastassis Perrakis; Jane S Richardson; William H Sheffler; Janet L Smith; Ian J Tickle; Gert Vriend; Peter H Zwart
Journal:  Structure       Date:  2011-10-12       Impact factor: 5.006
  4 in total

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