Literature DB >> 19161296

Identification of FTIR bands due to internal water molecules around the quinone binding sites in the reaction center from Rhodobacter sphaeroides.

Tatsuya Iwata1, Mark L Paddock, Melvin Y Okamura, Hideki Kandori.   

Abstract

The bacterial reaction center (RC) is a membrane protein complex that performs photosynthetic electron transfer from a bacteriochlorophyll dimer to quinone acceptors Q(A) and Q(B). Q(B) accepts electrons from the primary quinone, Q(A), in two sequential electron transfer reactions coupled to uptake of a proton from solution. It has been suggested that water molecules along the proton uptake pathway are protonated upon quinone reduction on the basis of FTIR difference spectra [Breton, J., and Nabedryk, E. (1998) Photosynth. Res. 55, 301-307]. We examined the possible involvement of water molecules in the photoreaction processes by studying (18)O water isotope effects on FTIR difference spectra resulting from formation of Q(A)(-) and Q(B)(-). Continuum bands in D(2)O due to Q(B)(-) formation in the 2300-1800 cm(-1) region did not show spectral shifts by (18)O water in the wild-type (WT) RC, suggesting that these bands do not originate from (protonated) water. In contrast, the Q(B)(-)/Q(B) spectrum of the EQ-L212 mutant RC showed a spectral shift of a band near 2100 cm(-1) due to (18)O water substitution, consistent with protonation of internal water. FTIR shifts due to (18)O water were also observed following formation of Q(A)(-) and Q(B)(-) in the spectral region of 3700-3500 cm(-1) characteristic of weakly hydrogen bonded water. The water responsible for the Q(B)(-) change was localized near Glu-L212 by spectral shifts in mutant RCs. The weakly hydrogen bonded water perturbed by quinone reduction may play a role in stabilizing the charge-separated state.

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Year:  2009        PMID: 19161296      PMCID: PMC2701474          DOI: 10.1021/bi801990s

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  36 in total

1.  Simultaneous replacement of Asp-L210 and Asp-M17 with Asn increases proton uptake by Glu-L212 upon first electron transfer to QB in reaction centers from Rhodobacter sphaeroides.

Authors:  E Nabedryk; J Breton; M Y Okamura; M L Paddock
Journal:  Biochemistry       Date:  2001-11-20       Impact factor: 3.162

Review 2.  Role of internal water molecules in bacteriorhodopsin.

Authors:  H Kandori
Journal:  Biochim Biophys Acta       Date:  2000-08-30

3.  Vibrational spectroscopy favors a unique QB binding site at the proximal position in wild-type reaction centers and in the Pro-L209 --> Tyr mutant from Rhodobacter sphaeroides.

Authors:  Jacques Breton; Claude Boullais; Charles Mioskowski; Pierre Sebban; Laura Baciou; Eliane Nabedryk
Journal:  Biochemistry       Date:  2002-10-29       Impact factor: 3.162

4.  Identification of the proton pathway in bacterial reaction centers: decrease of proton transfer rate by mutation of surface histidines at H126 and H128 and chemical rescue by imidazole identifies the initial proton donors.

Authors:  P Adelroth; M L Paddock; A Tehrani; J T Beatty; G Feher; M Y Okamura
Journal:  Biochemistry       Date:  2001-12-04       Impact factor: 3.162

5.  Vibrational frequency and dipolar orientation of the protonated Schiff base in bacteriorhodopsin before and after photoisomerization.

Authors:  Hideki Kandori; Marina Belenky; Judith Herzfeld
Journal:  Biochemistry       Date:  2002-05-14       Impact factor: 3.162

6.  Determination of the binding sites of the proton transfer inhibitors Cd2+ and Zn2+ in bacterial reaction centers.

Authors:  H L Axelrod; E C Abresch; M L Paddock; M Y Okamura; G Feher
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-15       Impact factor: 11.205

7.  Identification of the proton pathway in bacterial reaction centers: cooperation between Asp-M17 and Asp-L210 facilitates proton transfer to the secondary quinone (QB).

Authors:  M L Paddock; P Adelroth; C Chang; E C Abresch; G Feher; M Y Okamura
Journal:  Biochemistry       Date:  2001-06-12       Impact factor: 3.162

8.  The unusually strong hydrogen bond between the carbonyl of Q(A) and His M219 in the Rhodobacter sphaeroides reaction center is not essential for efficient electron transfer from Q(A)(-) to Q(B).

Authors:  Jacques Breton; Jérôme Lavergne; Marion C Wakeham; Eliane Nabedryk; Michael R Jones
Journal:  Biochemistry       Date:  2007-05-12       Impact factor: 3.162

9.  Identification of a novel protonation pattern for carboxylic acids upon Q(B) photoreduction in Rhodobacter sphaeroides reaction center mutants at Asp-L213 and Glu-L212 sites.

Authors:  Eliane Nabedryk; Jacques Breton; Melvin Y Okamura; Mark L Paddock
Journal:  Biochemistry       Date:  2004-06-15       Impact factor: 3.162

10.  Water molecules in the schiff base region of bacteriorhodopsin.

Authors:  Mikihiro Shibata; Taro Tanimoto; Hideki Kandori
Journal:  J Am Chem Soc       Date:  2003-11-05       Impact factor: 15.419

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  4 in total

Review 1.  Time-resolved infrared spectroscopy in the study of photosynthetic systems.

Authors:  Alberto Mezzetti; Winfried Leibl
Journal:  Photosynth Res       Date:  2016-09-27       Impact factor: 3.573

2.  Carboxylate shifts steer interquinone electron transfer in photosynthesis.

Authors:  Petko Chernev; Ivelina Zaharieva; Holger Dau; Michael Haumann
Journal:  J Biol Chem       Date:  2010-12-17       Impact factor: 5.157

3.  Water-assisted proton transfer in ferredoxin I.

Authors:  Stephan Lutz; Ivan Tubert-Brohman; Yonggang Yang; Markus Meuwly
Journal:  J Biol Chem       Date:  2011-04-29       Impact factor: 5.157

4.  Substitution of the D1-Asn87 site in photosystem II of cyanobacteria mimics the chloride-binding characteristics of spinach photosystem II.

Authors:  Gourab Banerjee; Ipsita Ghosh; Christopher J Kim; Richard J Debus; Gary W Brudvig
Journal:  J Biol Chem       Date:  2017-12-20       Impact factor: 5.157

  4 in total

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