Literature DB >> 19159081

On projection-reconstruction NMR.

Clark D Ridge1, Vladimir A Mandelshtam.   

Abstract

Three most simple Projection-Reconstruction algorithms, namely, the Lowest-Value, Additive Back-Projection and Hybrid Back-Projection/Lowest-Value algorithms, are analyzed. A new, also simple, algorithm that reconstructs the spectrum by utilizing the amplitude histogram at each reconstruction point, is explored. The algorithms are tested using simulated spectra. While all the algorithms considered can potentially result in substantial reduction of the amount of data needed for reconstruction, they can suffer from a number of drawbacks. In particular, they often fail when the spectra are noisy and/or contain overlapping peaks. When compared to the existing algorithms, the new, histogram-based algorithm has the potential advantage of being able to deal with spectra containing peaks of opposite phase.

Mesh:

Year:  2009        PMID: 19159081     DOI: 10.1007/s10858-008-9297-4

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  5 in total

1.  Reconstruction of the three-dimensional NMR spectrum of a protein from a set of plane projections.

Authors:  Eriks Kupce; Ray Freeman
Journal:  J Biomol NMR       Date:  2003-12       Impact factor: 2.835

2.  Projection-reconstruction technique for speeding up multidimensional NMR spectroscopy.

Authors:  Eriks Kupce; Ray Freeman
Journal:  J Am Chem Soc       Date:  2004-05-26       Impact factor: 15.419

3.  (4,2)D Projection--reconstruction experiments for protein backbone assignment: application to human carbonic anhydrase II and calbindin D(28K).

Authors:  Ronald A Venters; Brian E Coggins; Doug Kojetin; John Cavanagh; Pei Zhou
Journal:  J Am Chem Soc       Date:  2005-06-22       Impact factor: 15.419

4.  PR-CALC: a program for the reconstruction of NMR spectra from projections.

Authors:  Brian E Coggins; Pei Zhou
Journal:  J Biomol NMR       Date:  2006-03       Impact factor: 2.835

5.  Deterministic and statistical methods for reconstructing multidimensional NMR spectra.

Authors:  Ji Won Yoon; Simon Godsill; Eriks Kupce; Ray Freeman
Journal:  Magn Reson Chem       Date:  2006-03       Impact factor: 2.447

  5 in total
  2 in total

Review 1.  Radial sampling for fast NMR: Concepts and practices over three decades.

Authors:  Brian E Coggins; Ronald A Venters; Pei Zhou
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-07-30       Impact factor: 9.795

2.  Rapid three-dimensional MAS NMR spectroscopy at critical sensitivity.

Authors:  Yoh Matsuki; Matthew T Eddy; Robert G Griffin; Judith Herzfeld
Journal:  Angew Chem Int Ed Engl       Date:  2010-11-22       Impact factor: 15.336

  2 in total

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