Literature DB >> 19156802

Artificial ribozyme switches containing natural riboswitch aptamer domains.

Markus Wieland1, Armin Benz, Benedikt Klauser, Jörg S Hartig.   

Abstract

RNA Lego: The use of natural riboswitch aptamers in synthetic RNA switches (see picture) should broaden the scope of artificial RNA regulators dramatically. It is shown that thiamine pyrophosphate (TPP) aptamers can be used in engineered devices as very sensitive switches of gene expression in unmodified organisms. The approach demonstrates that intrinsic metabolites can be utilized as external effectors of cellular functions.

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Year:  2009        PMID: 19156802     DOI: 10.1002/anie.200805311

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  43 in total

1.  Kinetic analysis of aptazyme-regulated gene expression in a cell-free translation system: modeling of ligand-dependent and -independent expression.

Authors:  Shungo Kobori; Norikazu Ichihashi; Yasuaki Kazuta; Tomoaki Matsuura; Tetsuya Yomo
Journal:  RNA       Date:  2012-06-25       Impact factor: 4.942

Review 2.  Synthetic RNA switches as a tool for temporal and spatial control over gene expression.

Authors:  Andrew L Chang; Joshua J Wolf; Christina D Smolke
Journal:  Curr Opin Biotechnol       Date:  2012-02-03       Impact factor: 9.740

3.  Expanded hammerhead ribozymes containing addressable three-way junctions.

Authors:  Markus Wieland; Manuela Gfell; Jörg S Hartig
Journal:  RNA       Date:  2009-03-20       Impact factor: 4.942

4.  Investigation of mRNA quadruplex formation in Escherichia coli.

Authors:  Markus Wieland; Jörg S Hartig
Journal:  Nat Protoc       Date:  2009-10-22       Impact factor: 13.491

5.  A Theophylline-Responsive Riboswitch Regulates Expression of Nuclear-Encoded Genes.

Authors:  Nana Shanidze; Felina Lenkeit; Jörg S Hartig; Dietmar Funck
Journal:  Plant Physiol       Date:  2019-11-08       Impact factor: 8.340

Review 6.  Emerging applications of riboswitches in chemical biology.

Authors:  Shana Topp; Justin P Gallivan
Journal:  ACS Chem Biol       Date:  2010-01-15       Impact factor: 5.100

Review 7.  Synthetic biology: tools to design, build, and optimize cellular processes.

Authors:  Eric Young; Hal Alper
Journal:  J Biomed Biotechnol       Date:  2010-01-27

8.  In vitro selection of allosteric ribozymes that sense the bacterial second messenger c-di-GMP.

Authors:  Kazuhiro Furukawa; Hongzhou Gu; Ronald R Breaker
Journal:  Methods Mol Biol       Date:  2014

Review 9.  Eukaryotic systems broaden the scope of synthetic biology.

Authors:  Karmella A Haynes; Pamela A Silver
Journal:  J Cell Biol       Date:  2009-11-23       Impact factor: 10.539

10.  Design principles for ligand-sensing, conformation-switching ribozymes.

Authors:  Xi Chen; Andrew D Ellington
Journal:  PLoS Comput Biol       Date:  2009-12-24       Impact factor: 4.475

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