Literature DB >> 19150360

Transcript elongation factor TFIIS is involved in arabidopsis seed dormancy.

Marion Grasser1, Caroline M Kane, Thomas Merkle, Michael Melzer, Jeppe Emmersen, Klaus D Grasser.   

Abstract

Transcript elongation factor TFIIS promotes efficient transcription by RNA polymerase II, since it assists in bypassing blocks during mRNA synthesis. While yeast cells lacking TFIIS are viable, inactivation of mouse TFIIS causes embryonic lethality. Here, we have identified a protein encoded in the Arabidopsis genome that displays a marked sequence similarity to TFIIS of other organisms, primarily within domains II and III in the C-terminal part of the protein. TFIIS is widely expressed in Arabidopsis, and a green fluorescent protein-TFIIS fusion protein localises specifically to the cell nucleus. When expressed in yeast cells lacking the endogenous TFIIS, Arabidopsis TFIIS partially complements the sensitivity of mutant cells to the nucleotide analog 6-azauridine, which is a typical characteristic of transcript elongation factors. We have characterised Arabidopsis lines harbouring T-DNA insertions in the coding sequence of TFIIS. Plants homozygous for T-DNA insertions are viable, and genomewide transcript profiling revealed that compared to control plants, a relatively small number of genes are differentially expressed in mutant plants. TFIIS(-/-) plants display essentially normal development, but they flower slightly earlier than control plants and show clearly reduced seed dormancy. Plants with RNAi-mediated knockdown of TFIIS expression also are affected in seed dormancy. Therefore, TFIIS plays a critical role in Arabidopsis seed development.

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Year:  2009        PMID: 19150360     DOI: 10.1016/j.jmb.2008.12.066

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  27 in total

Review 1.  Genotoxic stress and DNA repair in plants: emerging functions and tools for improving crop productivity.

Authors:  Alma Balestrazzi; Massimo Confalonieri; Anca Macovei; Mattia Donà; Daniela Carbonera
Journal:  Plant Cell Rep       Date:  2010-12-19       Impact factor: 4.570

2.  The conserved chimeric transcript UPGRADE2 is associated with unreduced pollen formation and is exclusively found in apomictic Boechera species.

Authors:  Martin Mau; José M Corral; Heiko Vogel; Michael Melzer; Jörg Fuchs; Markus Kuhlmann; Nico de Storme; Danny Geelen; Timothy F Sharbel
Journal:  Plant Physiol       Date:  2013-10-15       Impact factor: 8.340

3.  Multifunctional RNA Binding Protein OsTudor-SN in Storage Protein mRNA Transport and Localization.

Authors:  Hong-Li Chou; Li Tian; Toshihiro Kumamaru; Shigeki Hamada; Thomas W Okita
Journal:  Plant Physiol       Date:  2017-10-30       Impact factor: 8.340

4.  NTR1 is required for transcription elongation checkpoints at alternative exons in Arabidopsis.

Authors:  Jakub Dolata; Yanwu Guo; Agnieszka Kołowerzo; Dariusz Smoliński; Grzegorz Brzyżek; Artur Jarmołowski; Szymon Świeżewski
Journal:  EMBO J       Date:  2015-01-07       Impact factor: 11.598

5.  Control of seed dormancy in Arabidopsis by a cis-acting noncoding antisense transcript.

Authors:  Halina Fedak; Malgorzata Palusinska; Katarzyna Krzyczmonik; Lien Brzezniak; Ruslan Yatusevich; Zbigniew Pietras; Szymon Kaczanowski; Szymon Swiezewski
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-15       Impact factor: 11.205

6.  The plant RNA polymerase II elongation complex: A hub coordinating transcript elongation and mRNA processing.

Authors:  Marion Grasser; Klaus D Grasser
Journal:  Transcription       Date:  2017-10-04

7.  Antisense transcription represses Arabidopsis seed dormancy QTL DOG1 to regulate drought tolerance.

Authors:  Ruslan Yatusevich; Halina Fedak; Arkadiusz Ciesielski; Katarzyna Krzyczmonik; Anna Kulik; Grazyna Dobrowolska; Szymon Swiezewski
Journal:  EMBO Rep       Date:  2017-10-13       Impact factor: 8.807

8.  Seed Dormancy in Arabidopsis Is Controlled by Alternative Polyadenylation of DOG1.

Authors:  Malgorzata Cyrek; Halina Fedak; Arkadiusz Ciesielski; Yanwu Guo; Aleksandra Sliwa; Lien Brzezniak; Katarzyna Krzyczmonik; Zbigniew Pietras; Szymon Kaczanowski; Fuquan Liu; Szymon Swiezewski
Journal:  Plant Physiol       Date:  2015-11-30       Impact factor: 8.340

9.  Light in the transcription landscape: chromatin, RNA polymerase II and splicing throughout Arabidopsis thaliana's life cycle.

Authors:  Rocío S Tognacca; M Guillermina Kubaczka; Lucas Servi; Florencia S Rodríguez; Micaela A Godoy Herz; Ezequiel Petrillo
Journal:  Transcription       Date:  2020-08-04

10.  Critical Role of Transcript Cleavage in Arabidopsis RNA Polymerase II Transcriptional Elongation.

Authors:  Wojciech Antosz; Jules Deforges; Kevin Begcy; Astrid Bruckmann; Yves Poirier; Thomas Dresselhaus; Klaus D Grasser
Journal:  Plant Cell       Date:  2020-03-09       Impact factor: 11.277

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