Literature DB >> 19146411

Electronic structure of the ground and excited states of the Cu(A) site by NMR spectroscopy.

Luciano A Abriata1, Gabriela N Ledesma, Roberta Pierattelli, Alejandro J Vila.   

Abstract

The electronic properties of Thermus thermophilus Cu(A) in the oxidized form were studied by (1)H and (13)C NMR spectroscopy. All of the (1)H and (13)C resonances from cysteine and imidazole ligands were observed and assigned in a sequence-specific fashion. The detection of net electron spin density on a peptide moiety is attributed to the presence of a H-bond to a coordinating sulfur atom. This hydrogen bond is conserved in all natural Cu(A) variants and plays an important role for maintaining the electronic structure of the metal site, rendering the two Cys ligands nonequivalent. The anomalous temperature dependence of the chemical shifts is explained by the presence of a low-lying excited state located about 600 cm(-1) above the ground state. The room-temperature shifts can be described as the thermal average of a sigma(u)* ground state and a pi(u) excited state. These results provide a detailed description of the electronic structure of the Cu(A) site at atomic resolution in solution at physiologically relevant temperature.

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Year:  2009        PMID: 19146411      PMCID: PMC2642605          DOI: 10.1021/ja8079669

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  53 in total

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Authors:  K Brown; M Tegoni; M Prudêncio; A S Pereira; S Besson; J J Moura; I Moura; C Cambillau
Journal:  Nat Struct Biol       Date:  2000-03

2.  A method for C(alpha) direct-detection in protonless NMR.

Authors:  Wolfgang Bermel; Ivano Bertini; Isabella C Felli; Manolis Matzapetakis; Roberta Pierattelli; Elizabeth C Theil; Paola Turano
Journal:  J Magn Reson       Date:  2007-08-02       Impact factor: 2.229

3.  Axial ligand modulation of the electronic structures of binuclear copper sites: analysis of paramagnetic 1H NMR spectra of Met160Gln Cu(A).

Authors:  C O Fernández; J A Cricco; C E Slutter; J H Richards; H B Gray; A J Vila
Journal:  J Am Chem Soc       Date:  2001-11-28       Impact factor: 15.419

4.  Metal-ligand interplay in blue copper proteins studied by 1H NMR spectroscopy: Cu(II)-pseudoazurin and Cu(II)-rusticyanin.

Authors:  Antonio Donaire; Beatriz Jiménez; Claudio O Fernández; Roberta Pierattelli; Tomotake Niizeki; José-María Moratal; John F Hall; Takamitsu Kohzuma; S Samar Hasnain; Alejandro J Vila
Journal:  J Am Chem Soc       Date:  2002-11-20       Impact factor: 15.419

5.  Geometry, reduction potential, and reorganization energy of the binuclear Cu(A) site, studied by density functional theory.

Authors:  M H Olsson; U Ryde
Journal:  J Am Chem Soc       Date:  2001-08-15       Impact factor: 15.419

6.  Paramagnetic NMR spectroscopy and density functional calculations in the analysis of the geometric and electronic structures of iron-sulfur proteins.

Authors:  Timothy E Machonkin; William M Westler; John L Markley
Journal:  Inorg Chem       Date:  2005-02-21       Impact factor: 5.165

7.  1H NMR studies on the CuA center of nitrous oxide reductase from Pseudomonas stutzeri.

Authors:  R C Holz; M L Alvarez; W G Zumft; D M Dooley
Journal:  Biochemistry       Date:  1999-08-24       Impact factor: 3.162

8.  1H NMR studies of the paramagnetic CuA center of cytochrome oxidase.

Authors:  C Dennison; A Berg; S de Vries; G W Canters
Journal:  FEBS Lett       Date:  1996-10-07       Impact factor: 4.124

9.  Construction and characterization of an azurin analog for the purple copper site in cytochrome c oxidase.

Authors:  M Hay; J H Richards; Y Lu
Journal:  Proc Natl Acad Sci U S A       Date:  1996-01-09       Impact factor: 11.205

10.  The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A.

Authors:  T Tsukihara; H Aoyama; E Yamashita; T Tomizaki; H Yamaguchi; K Shinzawa-Itoh; R Nakashima; R Yaono; S Yoshikawa
Journal:  Science       Date:  1996-05-24       Impact factor: 47.728

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  13 in total

1.  Formation and Electronic Structure of an Atypical CuA Site.

Authors:  Matthew O Ross; Oriana S Fisher; Marcos N Morgada; Matthew D Krzyaniak; Michael R Wasielewski; Alejandro J Vila; Brian M Hoffman; Amy C Rosenzweig
Journal:  J Am Chem Soc       Date:  2019-03-07       Impact factor: 15.419

2.  Alternative ground states enable pathway switching in biological electron transfer.

Authors:  Luciano A Abriata; Damián Álvarez-Paggi; Gabriela N Ledesma; Ninian J Blackburn; Alejandro J Vila; Daniel H Murgida
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-10       Impact factor: 11.205

3.  Molecular dynamics simulations of apocupredoxins: insights into the formation and stabilization of copper sites under entatic control.

Authors:  Luciano A Abriata; Alejandro J Vila; Matteo Dal Peraro
Journal:  J Biol Inorg Chem       Date:  2014-01-30       Impact factor: 3.358

4.  The IR-¹⁵N-HSQC-AP experiment: a new tool for NMR spectroscopy of paramagnetic molecules.

Authors:  Simone Ciofi-Baffoni; Angelo Gallo; Riccardo Muzzioli; Mario Piccioli
Journal:  J Biomol NMR       Date:  2014-01-11       Impact factor: 2.835

5.  Dramatic Electronic Perturbations of CuA Centers via Subtle Geometric Changes.

Authors:  Alcides J Leguto; Meghan A Smith; Marcos N Morgada; Ulises A Zitare; Daniel H Murgida; Kyle M Lancaster; Alejandro J Vila
Journal:  J Am Chem Soc       Date:  2019-01-08       Impact factor: 15.419

6.  Transforming a blue copper into a red copper protein: engineering cysteine and homocysteine into the axial position of azurin using site-directed mutagenesis and expressed protein ligation.

Authors:  Kevin M Clark; Yang Yu; Nicholas M Marshall; Nathan A Sieracki; Mark J Nilges; Ninian J Blackburn; Wilfred A van der Donk; Yi Lu
Journal:  J Am Chem Soc       Date:  2010-07-28       Impact factor: 15.419

7.  NMR study of the exchange coupling in the trinuclear cluster of the multicopper oxidase Fet3p.

Authors:  María-Eugenia Zaballa; Lynn Ziegler; Daniel J Kosman; Alejandro J Vila
Journal:  J Am Chem Soc       Date:  2010-08-18       Impact factor: 15.419

Review 8.  Cu(A) centers and their biosynthetic models in azurin.

Authors:  Masha G Savelieff; Yi Lu
Journal:  J Biol Inorg Chem       Date:  2010-02-19       Impact factor: 3.358

Review 9.  Walking the seven lines: binuclear copper A in cytochrome c oxidase and nitrous oxide reductase.

Authors:  Peter M H Kroneck
Journal:  J Biol Inorg Chem       Date:  2017-12-07       Impact factor: 3.358

10.  Electron spin density on the axial His ligand of high-spin and low-spin nitrophorin 2 probed by heteronuclear NMR spectroscopy.

Authors:  Luciano A Abriata; María-Eugenia Zaballa; Robert E Berry; Fei Yang; Hongjun Zhang; F Ann Walker; Alejandro J Vila
Journal:  Inorg Chem       Date:  2013-01-17       Impact factor: 5.165

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