Literature DB >> 23327568

Electron spin density on the axial His ligand of high-spin and low-spin nitrophorin 2 probed by heteronuclear NMR spectroscopy.

Luciano A Abriata1, María-Eugenia Zaballa, Robert E Berry, Fei Yang, Hongjun Zhang, F Ann Walker, Alejandro J Vila.   

Abstract

The electronic structure of heme proteins is exquisitely tuned by the interaction of the iron center with the axial ligands. NMR studies of paramagnetic heme systems have been focused on the heme signals, but signals from the axial ligands have been rather difficult to detect and assign. We report an extensive assignment of the (1)H, (13)C and (15)N resonances of the axial His ligand in the NO-carrying protein nitrophorin 2 (NP2) in the paramagnetic high-spin and low-spin forms, as well as in the diamagnetic NO complex. We find that the high-spin protein has σ spin delocalization to all atoms in the axial His57, which decreases in size as the number of bonds between Fe(III) and the atom in question increases, except that within the His57 imidazole ring the contact shifts are a balance between positive σ and negative π contributions. In contrast, the low-spin protein has π spin delocalization to all atoms of the imidazole ring. Our strategy, adequately combined with a selective residue labeling scheme, represents a straightforward characterization of the electron spin density in heme axial ligands.

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Year:  2013        PMID: 23327568      PMCID: PMC3594510          DOI: 10.1021/ic301805y

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  50 in total

1.  Role of the iron axial ligands of heme carrier HasA in heme uptake and release.

Authors:  Célia Caillet-Saguy; Mario Piccioli; Paola Turano; Gudrun Lukat-Rodgers; Nicolas Wolff; Kenton R Rodgers; Nadia Izadi-Pruneyre; Muriel Delepierre; Anne Lecroisey
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

2.  Heme proteins--diversity in structural characteristics, function, and folding.

Authors:  Lorna J Smith; Abdullah Kahraman; Janet M Thornton
Journal:  Proteins       Date:  2010-08-01

3.  Protein chemical shifts arising from alpha-helices and beta-sheets depend on solvent exposure.

Authors:  Franc Avbelj; Darko Kocjan; Robert L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-01       Impact factor: 11.205

4.  Nitric oxide binding to nitrophorin 4 induces complete distal pocket burial.

Authors:  A Weichsel; J F Andersen; S A Roberts; W R Montfort
Journal:  Nat Struct Biol       Date:  2000-07

5.  Paramagnetic NMR spectroscopy and density functional calculations in the analysis of the geometric and electronic structures of iron-sulfur proteins.

Authors:  Timothy E Machonkin; William M Westler; John L Markley
Journal:  Inorg Chem       Date:  2005-02-21       Impact factor: 5.165

6.  Proton nuclear magnetic resonance studies of the ligation states of the monomeric ferricytochrome c' from Rhodopseudomonas palustris. Modulation of axial histidine bonding via variable proton donation.

Authors:  J T Jackson; G N La Mar; R G Bartsch
Journal:  J Biol Chem       Date:  1983-02-10       Impact factor: 5.157

7.  Deciphering the structural role of histidine 83 for heme binding in hemophore HasA.

Authors:  Célia Caillet-Saguy; Paola Turano; Mario Piccioli; Gudrun S Lukat-Rodgers; Mirjam Czjzek; Bruno Guigliarelli; Nadia Izadi-Pruneyre; Kenton R Rodgers; Muriel Delepierre; Anne Lecroisey
Journal:  J Biol Chem       Date:  2007-12-27       Impact factor: 5.157

8.  Solution structural characteristics of cyanometmyoglobin: resonance assignment of heme cavity residues by two-dimensional NMR.

Authors:  S D Emerson; G La Mar
Journal:  Biochemistry       Date:  1990-02-13       Impact factor: 3.162

9.  Axial ligand complexes of the Rhodnius nitrophorins: reduction potentials, binding constants, EPR spectra, and structures of the 4-iodopyrazole and imidazole complexes of NP4.

Authors:  Robert E Berry; Xiao D Ding; Tatjana Kh Shokhireva; Andrzej Weichsel; William R Montfort; F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2003-12-13       Impact factor: 3.358

10.  The crystal structure of nitrophorin 4 at 1.5 A resolution: transport of nitric oxide by a lipocalin-based heme protein.

Authors:  J F Andersen; A Weichsel; C A Balfour; D E Champagne; W R Montfort
Journal:  Structure       Date:  1998-10-15       Impact factor: 5.006

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  4 in total

1.  NMR studies of the dynamics of nitrophorin 2 bound to nitric oxide.

Authors:  Dhanasekaran Muthu; Robert E Berry; Hongjun Zhang; F Ann Walker
Journal:  Biochemistry       Date:  2013-10-30       Impact factor: 3.162

2.  NMR investigations of nitrophorin 2 belt side chain effects on heme orientation and seating of native N-terminus NP2 and NP2(D1A).

Authors:  Robert E Berry; Dhanasekaran Muthu; Tatiana K Shokhireva; Sarah A Garrett; Allena M Goren; Hongjun Zhang; F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2013-11-30       Impact factor: 3.358

3.  NMR studies of the dynamics of high-spin nitrophorins: comparative studies of NP4 and NP2 at close to physiological pH.

Authors:  Robert E Berry; Dhanasekaran Muthu; Fei Yang; F Ann Walker
Journal:  Biochemistry       Date:  2014-12-24       Impact factor: 3.162

4.  Dimerization of nitrophorin 4 at low pH and comparison to the K1A mutant of nitrophorin 1.

Authors:  Robert E Berry; Fei Yang; Tatiana K Shokhireva; Angela M Amoia; Sarah A Garrett; Allena M Goren; Stephanie R Korte; Hongjun Zhang; Andrzej Weichsel; William R Montfort; F Ann Walker
Journal:  Biochemistry       Date:  2014-12-23       Impact factor: 3.162

  4 in total

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