Literature DB >> 19137334

High cell density production of Deinococcus radiodurans under optimized conditions.

Yi He1.   

Abstract

Deinococcus radiodurans is a bacterium being investigated for mechanisms of extreme radiation resistance and for bioremediation of environmental radioactive waste sites. In both fundamental and applied research settings, methods for large-scale production of D. radiodurans are needed. In this study, a systematic investigation was carried out to optimize D. radiodurans production at the 20-L fermentor scale. In defined medium, the phosphate buffer typically used was found to be inhibitory to D. radiodurans growth, and caused cell aggregation. Substitution of HEPES and MOPS buffers for phosphate buffer improved D. radiodurans growth characteristics. Several antifoaming agents were investigated to support large-scale production with submerged aeration, and the defoamer KFO 673 was chosen based on its ability to prevent foaming without affecting D. radiodurans growth. The conventional undefined rich medium tryptone/glucose/yeast extract (TGY) maximally supported D. radiodurans growth to an OD(600) of 10. Using a 'design of experiments' approach, we found glucose, Mg and Mn to be critical in supporting high-density growth of D. radiodurans. The optimal pH and temperature for D. radiodurans growth in large-scale preparations were 7.0 and 37 degrees C, respectively. Growth was carried out in a 20-L fermentor using the newly developed media under the optimal conditions. With addition of 10 g/L glucose, 0.5 g/L MgSO(4) . 7H(2)O, 5 microM MnCl(2) into TGY media, an OD(600) of 40 was achieved.

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Year:  2009        PMID: 19137334     DOI: 10.1007/s10295-008-0524-5

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  19 in total

Review 1.  Engineering radiation-resistant bacteria for environmental biotechnology.

Authors:  M J Daly
Journal:  Curr Opin Biotechnol       Date:  2000-06       Impact factor: 9.740

2.  Physiologic determinants of radiation resistance in Deinococcus radiodurans.

Authors:  A Venkateswaran; S C McFarlan; D Ghosal; K W Minton; A Vasilenko; K Makarova; L P Wackett; M J Daly
Journal:  Appl Environ Microbiol       Date:  2000-06       Impact factor: 4.792

3.  Utilization of carbohydrates and amino acids by Micrococcus radiodurans.

Authors:  H D RAJ; F L DURYEE; A M DEENEY; C H WANG; A W ANDERSON; P R ELLIKER
Journal:  Can J Microbiol       Date:  1960-06       Impact factor: 2.419

Review 4.  Deinococcus radiodurans - the consummate survivor.

Authors:  Michael M Cox; John R Battista
Journal:  Nat Rev Microbiol       Date:  2005-11       Impact factor: 60.633

5.  Deinococcus radiodurans engineered for complete toluene degradation facilitates Cr(VI) reduction.

Authors:  Hassan Brim; Jeffrey P Osborne; Heather M Kostandarithes; James K Fredrickson; Lawrence P Wackett; Michael J Daly
Journal:  Microbiology       Date:  2006-08       Impact factor: 2.777

6.  In vivo damage and recA-dependent repair of plasmid and chromosomal DNA in the radiation-resistant bacterium Deinococcus radiodurans.

Authors:  M J Daly; L Ouyang; P Fuchs; K W Minton
Journal:  J Bacteriol       Date:  1994-06       Impact factor: 3.490

7.  Engineering a recombinant Deinococcus radiodurans for organopollutant degradation in radioactive mixed waste environments.

Authors:  C C Lange; L P Wackett; K W Minton; M J Daly
Journal:  Nat Biotechnol       Date:  1998-10       Impact factor: 54.908

8.  Engineering Deinococcus geothermalis for bioremediation of high-temperature radioactive waste environments.

Authors:  Hassan Brim; Amudhan Venkateswaran; Heather M Kostandarithes; James K Fredrickson; Michael J Daly
Journal:  Appl Environ Microbiol       Date:  2003-08       Impact factor: 4.792

9.  Protein oxidation implicated as the primary determinant of bacterial radioresistance.

Authors:  Michael J Daly; Elena K Gaidamakova; Vera Y Matrosova; Alexander Vasilenko; Min Zhai; Richard D Leapman; Barry Lai; Bruce Ravel; Shu-Mei W Li; Kenneth M Kemner; James K Fredrickson
Journal:  PLoS Biol       Date:  2007-04       Impact factor: 8.029

10.  Deinococcus geothermalis: the pool of extreme radiation resistance genes shrinks.

Authors:  Kira S Makarova; Marina V Omelchenko; Elena K Gaidamakova; Vera Y Matrosova; Alexander Vasilenko; Min Zhai; Alla Lapidus; Alex Copeland; Edwin Kim; Miriam Land; Konstantinos Mavrommatis; Samuel Pitluck; Paul M Richardson; Chris Detter; Thomas Brettin; Elizabeth Saunders; Barry Lai; Bruce Ravel; Kenneth M Kemner; Yuri I Wolf; Alexander Sorokin; Anna V Gerasimova; Mikhail S Gelfand; James K Fredrickson; Eugene V Koonin; Michael J Daly
Journal:  PLoS One       Date:  2007-09-26       Impact factor: 3.240

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  8 in total

1.  Experimental and statistical analysis of nutritional requirements for the growth of the extremophile Deinococcus geothermalis DSM 11300.

Authors:  Julie Bornot; César-Arturo Aceves-Lara; Carole Molina-Jouve; Jean-Louis Uribelarrea; Nathalie Gorret
Journal:  Extremophiles       Date:  2014-09-11       Impact factor: 2.395

Review 2.  Oxidative stress resistance in Deinococcus radiodurans.

Authors:  Dea Slade; Miroslav Radman
Journal:  Microbiol Mol Biol Rev       Date:  2011-03       Impact factor: 11.056

3.  Physiology of resistant Deinococcus geothermalis bacterium aerobically cultivated in low-manganese medium.

Authors:  Christina Liedert; Minna Peltola; Jörg Bernhardt; Peter Neubauer; Mirja Salkinoja-Salonen
Journal:  J Bacteriol       Date:  2012-01-06       Impact factor: 3.490

4.  Small-molecule antioxidant proteome-shields in Deinococcus radiodurans.

Authors:  Michael J Daly; Elena K Gaidamakova; Vera Y Matrosova; Juliann G Kiang; Risaku Fukumoto; Duck-Yeon Lee; Nancy B Wehr; Gabriela A Viteri; Barbara S Berlett; Rodney L Levine
Journal:  PLoS One       Date:  2010-09-03       Impact factor: 3.240

5.  A multidomain connector links the outer membrane and cell wall in phylogenetically deep-branching bacteria.

Authors:  Andriko von Kügelgen; Sofie van Dorst; Vikram Alva; Tanmay A M Bharat
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-09       Impact factor: 12.779

6.  Quantitative Characterization of the Growth of Deinococcus geothermalis DSM-11302: Effect of Inoculum Size, Growth Medium and Culture Conditions.

Authors:  Julie Bornot; Carole Molina-Jouve; Jean-Louis Uribelarrea; Nathalie Gorret
Journal:  Microorganisms       Date:  2015-08-20

7.  Proteometabolomic response of Deinococcus radiodurans exposed to UVC and vacuum conditions: Initial studies prior to the Tanpopo space mission.

Authors:  Emanuel Ott; Yuko Kawaguchi; Denise Kölbl; Palak Chaturvedi; Kazumichi Nakagawa; Akihiko Yamagishi; Wolfram Weckwerth; Tetyana Milojevic
Journal:  PLoS One       Date:  2017-12-15       Impact factor: 3.240

8.  Proteomic Response of Deinococcus radiodurans to Short-Term Real Microgravity during Parabolic Flight Reveals Altered Abundance of Proteins Involved in Stress Response and Cell Envelope Functions.

Authors:  Karlis Arturs Moors; Emanuel Ott; Wolfram Weckwerth; Tetyana Milojevic
Journal:  Life (Basel)       Date:  2021-12-24
  8 in total

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