Literature DB >> 19130907

Gly192 at hinge 2 site in the chaperonin GroEL plays a pivotal role in the dynamic apical domain movement that leads to GroES binding and efficient encapsulation of substrate proteins.

Kodai Machida1, Ryoko Fujiwara, Tatsuhide Tanaka, Isao Sakane, Kunihiro Hongo, Tomohiro Mizobata, Yasushi Kawata.   

Abstract

The subunit structure of chaperonin GroEL is divided into three domains; the apical domain, the intermediate domain, and the equatorial domain. Each domain has a specific role in the chaperonin mechanism. The 'hinge 2' site of GroEL contains three glycine residues, Gly192, Gly374, and Gly375, connecting the apical domain and the intermediate domain. In this study, to understand the importance of the hinge 2 amino acid residues in chaperonin function, we substituted each of these three glycine residues to tryptophan. The GroEL mutants G374W and G375W were functionally similar to wild-type GroEL. However, GroEL G192W showed a significant decrease in the ability to assist the refolding of stringent substrate proteins. Interestingly, from biochemical assays and characterization using surface plasmon resonance analysis, we found that GroEL G192W was capable of binding GroES even in the absence of ATP to form a very stable GroEL-GroES complex, which could not be dissociated even upon addition of ATP. Electron micrographs showed that GroEL G192W intrinsically formed an asymmetric double ring structure with one ring locked in the 'open' conformation, and it is postulated that GroES binds to this open ring in the absence of ATP. Trans-binding of both substrate protein and GroES was observed for this binary complex, but simultaneous binding of both substrate and GroES (a mechanism that ensures substrate encapsulation) was impaired. We postulate that alteration of Gly192 severely compromises an essential movement that allows efficient encapsulation of unfolded protein intermediates.

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Year:  2008        PMID: 19130907     DOI: 10.1016/j.bbapap.2008.12.003

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  9 in total

1.  Acid-denatured small heat shock protein HdeA from Escherichia coli forms reversible fibrils with an atypical secondary structure.

Authors:  Shiori Miyawaki; Yumi Uemura; Kunihiro Hongo; Yasushi Kawata; Tomohiro Mizobata
Journal:  J Biol Chem       Date:  2018-12-10       Impact factor: 5.157

2.  Modulating the Effects of the Bacterial Chaperonin GroEL on Fibrillogenic Polypeptides through Modification of Domain Hinge Architecture.

Authors:  Naoya Fukui; Kiho Araki; Kunihiro Hongo; Tomohiro Mizobata; Yasushi Kawata
Journal:  J Biol Chem       Date:  2016-10-14       Impact factor: 5.157

3.  Distinct features of protein folding by the GroEL system from a psychrophilic bacterium, Colwellia psychrerythraea 34H.

Authors:  Seiji Yamauchi; Yuya Ueda; Mika Matsumoto; Umihiko Inoue; Hidenori Hayashi
Journal:  Extremophiles       Date:  2012-09-21       Impact factor: 2.395

Review 4.  The versatile mutational "repertoire" of Escherichia coli GroEL, a multidomain chaperonin nanomachine.

Authors:  Tomohiro Mizobata; Yasushi Kawata
Journal:  Biophys Rev       Date:  2017-11-27

5.  Probing the functional mechanism of Escherichia coli GroEL using circular permutation.

Authors:  Tomohiro Mizobata; Tatsuya Uemura; Kazuhiro Isaji; Takuma Hirayama; Kunihiro Hongo; Yasushi Kawata
Journal:  PLoS One       Date:  2011-10-18       Impact factor: 3.240

Review 6.  GroEL-A Versatile Chaperone for Engineering and a Plethora of Applications.

Authors:  Maria S Yurkova; Alexey N Fedorov
Journal:  Biomolecules       Date:  2022-04-19

7.  GroEL2 of Mycobacterium tuberculosis Reveals the Importance of Structural Pliability in Chaperonin Function.

Authors:  Neeraja Chilukoti; C M Santosh Kumar; Shekhar C Mande
Journal:  J Bacteriol       Date:  2015-11-09       Impact factor: 3.490

8.  Probing the dynamic process of encapsulation in Escherichia coli GroEL.

Authors:  Toshifumi Mizuta; Kasumi Ando; Tatsuya Uemura; Yasushi Kawata; Tomohiro Mizobata
Journal:  PLoS One       Date:  2013-10-30       Impact factor: 3.240

9.  Human Molecular Chaperone Hsp60 and Its Apical Domain Suppress Amyloid Fibril Formation of α-Synuclein.

Authors:  Hanae Yamamoto; Naoya Fukui; Mayuka Adachi; Eiichi Saiki; Anna Yamasaki; Rio Matsumura; Daichi Kuroyanagi; Kunihiro Hongo; Tomohiro Mizobata; Yasushi Kawata
Journal:  Int J Mol Sci       Date:  2019-12-19       Impact factor: 5.923

  9 in total

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