Literature DB >> 27742838

Modulating the Effects of the Bacterial Chaperonin GroEL on Fibrillogenic Polypeptides through Modification of Domain Hinge Architecture.

Naoya Fukui1, Kiho Araki1, Kunihiro Hongo1,2, Tomohiro Mizobata1,2, Yasushi Kawata3,2.   

Abstract

The isolated apical domain of the Escherichia coli GroEL subunit displays the ability to suppress the irreversible fibrillation of numerous amyloid-forming polypeptides. In previous experiments, we have shown that mutating Gly-192 (located at hinge II that connects the apical domain and the intermediate domain) to a tryptophan results in an inactive chaperonin whose apical domain is disoriented. In this study, we have utilized this disruptive effect of Gly-192 mutation to our advantage, by substituting this residue with amino acid residues of varying van der Waals volumes with the intent to modulate the affinity of GroEL toward fibrillogenic peptides. The affinities of GroEL toward fibrillogenic polypeptides such as Aβ(1-40) (amyloid-β(1-40)) peptide and α-synuclein increased in accordance to the larger van der Waals volume of the substituent amino acid side chain in the G192X mutants. When we compared the effects of wild-type GroEL and selected GroEL G192X mutants on α-synuclein fibril formation, we found that the effects of the chaperonin on α-synuclein fibrillation were different; the wild-type chaperonin caused changes in both the initial lag phase and the rate of fibril extension, whereas the effects of the G192X mutants were more specific toward the nucleus-forming lag phase. The chaperonins also displayed differential effects on α-synuclein fibril morphology, suggesting that through mutation of Gly-192, we may induce changes to the intermolecular affinities between GroEL and α-synuclein, leading to more efficient fibril suppression, and in specific cases, modulation of fibril morphology.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  GroEL; alpha-synuclein (a-synuclein); amyloid fibrils; chaperonin; protein aggregation; protein engineering; protein misfolding; protein-protein interaction

Mesh:

Substances:

Year:  2016        PMID: 27742838      PMCID: PMC5122787          DOI: 10.1074/jbc.M116.751925

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  35 in total

Review 1.  The GroEL-GroES Chaperonin Machine: A Nano-Cage for Protein Folding.

Authors:  Manajit Hayer-Hartl; Andreas Bracher; F Ulrich Hartl
Journal:  Trends Biochem Sci       Date:  2015-09-25       Impact factor: 13.807

2.  GroEL stimulates protein folding through forced unfolding.

Authors:  Zong Lin; Damian Madan; Hays S Rye
Journal:  Nat Struct Mol Biol       Date:  2008-03-02       Impact factor: 15.369

Review 3.  Genetic aspects of amyloidosis.

Authors:  D R Jacobson; J N Buxbaum
Journal:  Adv Hum Genet       Date:  1991

Review 4.  Amyloidogenesis of natively unfolded proteins.

Authors:  Vladimir N Uversky
Journal:  Curr Alzheimer Res       Date:  2008-06       Impact factor: 3.498

5.  Hsp104, Hsp70 and Hsp40 interplay regulates formation, growth and elimination of Sup35 prions.

Authors:  James Shorter; Susan Lindquist
Journal:  EMBO J       Date:  2008-10-02       Impact factor: 11.598

6.  Monitoring protein conformation along the pathway of chaperonin-assisted folding.

Authors:  Shruti Sharma; Kausik Chakraborty; Barbara K Müller; Nagore Astola; Yun-Chi Tang; Don C Lamb; Manajit Hayer-Hartl; F Ulrich Hartl
Journal:  Cell       Date:  2008-04-04       Impact factor: 41.582

7.  The crystal structure of the asymmetric GroEL-GroES-(ADP)7 chaperonin complex.

Authors:  Z Xu; A L Horwich; P B Sigler
Journal:  Nature       Date:  1997-08-21       Impact factor: 49.962

8.  NMR characterization of the interaction of GroEL with amyloid β as a model ligand.

Authors:  Maho Yagi-Utsumi; Tomoko Kunihara; Takashi Nakamura; Yoshinori Uekusa; Koki Makabe; Kunihiro Kuwajima; Koichi Kato
Journal:  FEBS Lett       Date:  2013-04-18       Impact factor: 4.124

9.  Molecular structure of β-amyloid fibrils in Alzheimer's disease brain tissue.

Authors:  Jun-Xia Lu; Wei Qiang; Wai-Ming Yau; Charles D Schwieters; Stephen C Meredith; Robert Tycko
Journal:  Cell       Date:  2013-09-12       Impact factor: 41.582

10.  Binding of the molecular chaperone αB-crystallin to Aβ amyloid fibrils inhibits fibril elongation.

Authors:  Sarah L Shammas; Christopher A Waudby; Shuyu Wang; Alexander K Buell; Tuomas P J Knowles; Heath Ecroyd; Mark E Welland; John A Carver; Christopher M Dobson; Sarah Meehan
Journal:  Biophys J       Date:  2011-10-05       Impact factor: 4.033

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  7 in total

1.  Acid-denatured small heat shock protein HdeA from Escherichia coli forms reversible fibrils with an atypical secondary structure.

Authors:  Shiori Miyawaki; Yumi Uemura; Kunihiro Hongo; Yasushi Kawata; Tomohiro Mizobata
Journal:  J Biol Chem       Date:  2018-12-10       Impact factor: 5.157

Review 2.  The versatile mutational "repertoire" of Escherichia coli GroEL, a multidomain chaperonin nanomachine.

Authors:  Tomohiro Mizobata; Yasushi Kawata
Journal:  Biophys Rev       Date:  2017-11-27

3.  HSP10 as a Chaperone for Neurodegenerative Amyloid Fibrils.

Authors:  Johan N K Larsson; Sofie Nyström; Per Hammarström
Journal:  Front Neurosci       Date:  2022-06-13       Impact factor: 5.152

Review 4.  GroEL-A Versatile Chaperone for Engineering and a Plethora of Applications.

Authors:  Maria S Yurkova; Alexey N Fedorov
Journal:  Biomolecules       Date:  2022-04-19

Review 5.  Regulation by Different Types of Chaperones of Amyloid Transformation of Proteins Involved in the Development of Neurodegenerative Diseases.

Authors:  Vladimir I Muronetz; Sofia S Kudryavtseva; Evgeniia V Leisi; Lidia P Kurochkina; Kseniya V Barinova; Elena V Schmalhausen
Journal:  Int J Mol Sci       Date:  2022-03-02       Impact factor: 5.923

6.  Proteomic Response of Pseudomonas putida KT2440 to Dual Carbon-Phosphorus Limitation during mcl-PHAs Synthesis.

Authors:  Justyna Możejko-Ciesielska; Luísa S Serafim
Journal:  Biomolecules       Date:  2019-11-28

7.  Human Molecular Chaperone Hsp60 and Its Apical Domain Suppress Amyloid Fibril Formation of α-Synuclein.

Authors:  Hanae Yamamoto; Naoya Fukui; Mayuka Adachi; Eiichi Saiki; Anna Yamasaki; Rio Matsumura; Daichi Kuroyanagi; Kunihiro Hongo; Tomohiro Mizobata; Yasushi Kawata
Journal:  Int J Mol Sci       Date:  2019-12-19       Impact factor: 5.923

  7 in total

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