Literature DB >> 19126730

Description of Patulibacter americanus sp. nov., isolated from biological soil crusts, emended description of the genus Patulibacter Takahashi et al. 2006 and proposal of Solirubrobacterales ord. nov. and Thermoleophilales ord. nov.

Gundlapally S N Reddy1, Ferran Garcia-Pichel.   

Abstract

Two bacterial strains, CP153-3 and CP177-2T, were isolated from biological soil crusts on the Colorado Plateau, USA, and assigned to the genus Patulibacter, according to 16S rRNA gene sequence analysis and phenotypic characteristics. The strains were Gram-positive, aerobic and psychrotolerant and showed positive catalase and negative oxidase reactions. Cells were motile in young cultures, motility consisting of subtle jerking motions, but no flagella could be detected. The strains shared high 16S rRNA gene sequence similarity (99.7 %) and DNA-DNA relatedness (99 %). They contained meso-diaminopimelic acid in the cell wall, the major menaquinone was MK-7(H2) and the predominant fatty acids were C(18 : 1)omega9c and iso-C(15 : 0). A low DNA-DNA hybridization value of 20 % with the type strain of the type species of the genus Patulibacter, Patulibacter minatonensis, as well as phenotypic differences, indicated that the isolates belong to a novel species, for which the name Patulibacter americanus sp. nov. is proposed. Strain CP177-2T (=ATCC BAA-1038(T) =DSM 16676T) was chosen as the type strain. An emended description of the genus Patulibacter is also presented. Further, two new orders are created to accommodate several families previously classified in the order Rubrobacterales Rainey et al. 1997. The first, Solirubrobacterales ord. nov., encompasses the families Solirubrobacteraceae, Conexibacteraceae and Patulibacteraceae, and the second, Thermoleophilales ord. nov., includes the family Thermoleophilaceae.

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Year:  2009        PMID: 19126730     DOI: 10.1099/ijs.0.64185-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  14 in total

1.  Distribution and isolation of strains belonging to the order Solirubrobacterales.

Authors:  Tamae Seki; Atsuko Matsumoto; Satoshi Ōmura; Yōko Takahashi
Journal:  J Antibiot (Tokyo)       Date:  2015-07-01       Impact factor: 2.649

2.  Genome-Based Taxonomic Classification of the Phylum Actinobacteria.

Authors:  Imen Nouioui; Lorena Carro; Marina García-López; Jan P Meier-Kolthoff; Tanja Woyke; Nikos C Kyrpides; Rüdiger Pukall; Hans-Peter Klenk; Michael Goodfellow; Markus Göker
Journal:  Front Microbiol       Date:  2018-08-22       Impact factor: 5.640

3.  Baekduia soli gen. nov., sp. nov., a novel bacterium isolated from the soil of Baekdu Mountain and proposal of a novel family name, Baekduiaceae fam. nov.

Authors:  Dong-Shan An; Muhammad Zubair Siddiqi; Kyoung-Ho Kim; Hong-Shan Yu; Wan-Taek Im
Journal:  J Microbiol       Date:  2018-01-04       Impact factor: 3.422

4.  Description of Pseudomonas asuensis sp. nov. from biological soil crusts in the Colorado plateau, United States of America.

Authors:  Gundlapally Sathyanarayana Reddy; Ferran Garcia-Pichel
Journal:  J Microbiol       Date:  2015-01-04       Impact factor: 3.422

5.  Complete genome sequence of 'Thermobaculum terrenum' type strain (YNP1).

Authors:  Hajnalka Kiss; David Cleland; Alla Lapidus; Susan Lucas; Tijana Glavina Del Rio; Matt Nolan; Hope Tice; Cliff Han; Lynne Goodwin; Sam Pitluck; Konstantinos Liolios; Natalia Ivanova; Konstantinos Mavromatis; Galina Ovchinnikova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Megan Lu; Thomas Brettin; John C Detter; Markus Göker; Brian J Tindall; Brian Beck; Timothy R McDermott; Tanja Woyke; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; Jan-Fang Cheng
Journal:  Stand Genomic Sci       Date:  2010-10-27

6.  Complete genome sequence of Conexibacter woesei type strain (ID131577).

Authors:  Rüdiger Pukall; Alla Lapidus; Tijana Glavina Del Rio; Alex Copeland; Hope Tice; Jan-Fang Cheng; Susan Lucas; Feng Chen; Matt Nolan; David Bruce; Lynne Goodwin; Sam Pitluck; Konstantinos Mavromatis; Natalia Ivanova; Galina Ovchinnikova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Patrick Chain; Linda Meincke; David Sims; Thomas Brettin; John C Detter; Manfred Rohde; Markus Göker; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Nikos C Kyrpides; Hans-Peter Klenk; Philip Hugenholtz
Journal:  Stand Genomic Sci       Date:  2010-03-30

7.  Microbiomes of ant castes implicate new microbial roles in the fungus-growing ant Trachymyrmex septentrionalis.

Authors:  Heather D Ishak; Jessica L Miller; Ruchira Sen; Scot E Dowd; Eli Meyer; Ulrich G Mueller
Journal:  Sci Rep       Date:  2011-12-22       Impact factor: 4.379

8.  Isolation of a significant fraction of non-phototroph diversity from a desert Biological Soil Crust.

Authors:  Ulisses Nunes da Rocha; Hinsby Cadillo-Quiroz; Ulas Karaoz; Lara Rajeev; Niels Klitgord; Sean Dunn; Viet Truong; Mayra Buenrostro; Benjamin P Bowen; Ferran Garcia-Pichel; Aindrila Mukhopadhyay; Trent R Northen; Eoin L Brodie
Journal:  Front Microbiol       Date:  2015-04-14       Impact factor: 5.640

Review 9.  Mangrove rare actinobacteria: taxonomy, natural compound, and discovery of bioactivity.

Authors:  Adzzie-Shazleen Azman; Iekhsan Othman; Saraswati S Velu; Kok-Gan Chan; Learn-Han Lee
Journal:  Front Microbiol       Date:  2015-08-20       Impact factor: 5.640

10.  Colonization patterns of soil microbial communities in the Atacama Desert.

Authors:  Alexander Crits-Christoph; Courtney K Robinson; Tyler Barnum; W Florian Fricke; Alfonso F Davila; Bruno Jedynak; Christopher P McKay; Jocelyne Diruggiero
Journal:  Microbiome       Date:  2013-11-20       Impact factor: 14.650

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