Literature DB >> 19119850

In vitro kinetic analysis of substrate specificity in enterobactin biosynthetic lower pathway enzymes provides insight into the biochemical function of the hot dog-fold thioesterase EntH.

Danqi Chen1, Rui Wu, Tyrel L Bryan, Debra Dunaway-Mariano.   

Abstract

The Escherichia coli siderophore enterobactin is assembled from 2,3-dihydroxybenzoate (2,3-DHB) and l-serine by the nonribosomal peptide synthetases EntB and EntF. The processive thiol-template strategy used can be sabotaged by EntB misacylation. Through in vitro kinetic analysis, we demonstrate two potential routes to EntB misacylation and provide evidence for two mechanisms by which the hot dog-fold thioesterase EntH can potentially prevent or reverse EntB misacylation.

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Year:  2009        PMID: 19119850      PMCID: PMC2929593          DOI: 10.1021/bi802207t

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

Review 1.  Genetics and assembly line enzymology of siderophore biosynthesis in bacteria.

Authors:  Jorge H Crosa; Christopher T Walsh
Journal:  Microbiol Mol Biol Rev       Date:  2002-06       Impact factor: 11.056

2.  Regeneration of misprimed nonribosomal peptide synthetases by type II thioesterases.

Authors:  Dirk Schwarzer; Henning D Mootz; Uwe Linne; Mohamed A Marahiel
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-16       Impact factor: 11.205

3.  Type II thioesterase restores activity of a NRPS module stalled with an aminoacyl-S-enzyme that cannot be elongated.

Authors:  Ellen Yeh; Rahul M Kohli; Steven D Bruner; Christopher T Walsh
Journal:  Chembiochem       Date:  2004-09-06       Impact factor: 3.164

4.  PchC thioesterase optimizes nonribosomal biosynthesis of the peptide siderophore pyochelin in Pseudomonas aeruginosa.

Authors:  Cornelia Reimmann; Hiten M Patel; Christopher T Walsh; Dieter Haas
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

5.  The hotdog thioesterase EntH (YbdB) plays a role in vivo in optimal enterobactin biosynthesis by interacting with the ArCP domain of EntB.

Authors:  Damien Leduc; Aurélia Battesti; Emmanuelle Bouveret
Journal:  J Bacteriol       Date:  2007-08-03       Impact factor: 3.490

Review 6.  Iron and virulence in the family Enterobacteriaceae.

Authors:  S M Payne
Journal:  Crit Rev Microbiol       Date:  1988       Impact factor: 7.624

7.  Enterobactin biosynthesis in Escherichia coli: isochorismate lyase (EntB) is a bifunctional enzyme that is phosphopantetheinylated by EntD and then acylated by EntE using ATP and 2,3-dihydroxybenzoate.

Authors:  A M Gehring; K A Bradley; C T Walsh
Journal:  Biochemistry       Date:  1997-07-15       Impact factor: 3.162

Review 8.  Enterobactin: an archetype for microbial iron transport.

Authors:  Kenneth N Raymond; Emily A Dertz; Sanggoo S Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-24       Impact factor: 11.205

9.  The Hotdog fold: wrapping up a superfamily of thioesterases and dehydratases.

Authors:  Shane C Dillon; Alex Bateman
Journal:  BMC Bioinformatics       Date:  2004-08-12       Impact factor: 3.169

  9 in total
  16 in total

Review 1.  The phosphopantetheinyl transferases: catalysis of a post-translational modification crucial for life.

Authors:  Joris Beld; Eva C Sonnenschein; Christopher R Vickery; Joseph P Noel; Michael D Burkart
Journal:  Nat Prod Rep       Date:  2014-01       Impact factor: 13.423

2.  Human brown fat inducible thioesterase variant 2 cellular localization and catalytic function.

Authors:  Danqi Chen; John Latham; Hong Zhao; Marco Bisoffi; Jeremiah Farelli; Debra Dunaway-Mariano
Journal:  Biochemistry       Date:  2012-08-23       Impact factor: 3.162

Review 3.  Structural insights into nonribosomal peptide enzymatic assembly lines.

Authors:  Alexander Koglin; Christopher T Walsh
Journal:  Nat Prod Rep       Date:  2009-05-22       Impact factor: 13.423

4.  Structure, activity, and substrate selectivity of the Orf6 thioesterase from Photobacterium profundum.

Authors:  María Rodríguez-Guilbe; Delise Oyola-Robles; Eric R Schreiter; Abel Baerga-Ortiz
Journal:  J Biol Chem       Date:  2013-02-21       Impact factor: 5.157

5.  Structural and functional investigation of the intermolecular interaction between NRPS adenylation and carrier protein domains.

Authors:  Jesse A Sundlov; Ce Shi; Daniel J Wilson; Courtney C Aldrich; Andrew M Gulick
Journal:  Chem Biol       Date:  2012-02-24

6.  The catalytic mechanism of the hotdog-fold enzyme superfamily 4-hydroxybenzoyl-CoA thioesterase from Arthrobacter sp. strain SU.

Authors:  Feng Song; James B Thoden; Zhihao Zhuang; John Latham; Michael Trujillo; Hazel M Holden; Debra Dunaway-Mariano
Journal:  Biochemistry       Date:  2012-08-20       Impact factor: 3.162

Review 7.  Enzyme promiscuity: engine of evolutionary innovation.

Authors:  Chetanya Pandya; Jeremiah D Farelli; Debra Dunaway-Mariano; Karen N Allen
Journal:  J Biol Chem       Date:  2014-09-10       Impact factor: 5.157

8.  YbtT is a low-specificity type II thioesterase that maintains production of the metallophore yersiniabactin in pathogenic enterobacteria.

Authors:  Shannon I Ohlemacher; Yiquan Xu; Daniel L Kober; Mahnoor Malik; Jay C Nix; Tom J Brett; Jeffrey P Henderson
Journal:  J Biol Chem       Date:  2018-10-24       Impact factor: 5.157

9.  Structure and catalytic mechanism of the thioesterase CalE7 in enediyne biosynthesis.

Authors:  Masayo Kotaka; Rong Kong; Insaf Qureshi; Qin Shi Ho; Huihua Sun; Chong Wai Liew; Lan Pei Goh; Peter Cheung; Yuguang Mu; Julien Lescar; Zhao-Xun Liang
Journal:  J Biol Chem       Date:  2009-04-08       Impact factor: 5.157

Review 10.  Active site comparisons and catalytic mechanisms of the hot dog superfamily.

Authors:  Jason W Labonte; Craig A Townsend
Journal:  Chem Rev       Date:  2012-12-03       Impact factor: 60.622

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