Literature DB >> 12384573

Regeneration of misprimed nonribosomal peptide synthetases by type II thioesterases.

Dirk Schwarzer1, Henning D Mootz, Uwe Linne, Mohamed A Marahiel.   

Abstract

Nonribosomal peptide synthetases (NRPSs) assemble structurally complex peptides from simple building blocks such as amino and carboxyl acids. Product release by macrocyclization or hydrolysis is catalyzed by a thioesterase domain that is an integrated part of the NRPS enzyme. A second thioesterase of type II (TEII) encoded by a distinct gene associated with the NRPS cluster was previously shown by means of gene disruption to be important for efficient product formation. However, the actual role of TEIIs in nonribosomal peptide synthesis remained obscure. Here we report the biochemical characterization of two such TEII enzymes that are associated with the synthetases of the peptide antibiotics surfactin (TEII(srf)) and bacitracin (TEII(bac)). Both enzymes were shown to efficiently regenerate misacylated thiol groups of 4'-phosphopantetheine (4'PP) cofactors attached to the peptidyl carrier proteins (PCPs) of NRPSs. For TEII(srf), a K(M) of 0.9 microM and a k(cat) of 95 min(-1) was determined for acetyl-PCP hydrolysis. Both enzymes could also hydrolyze aminoacyl or peptidyl PCPs, intermediates of nonribosomal peptide synthesis. However, this reaction is unlikely to be of physiological relevance. Similar intermediates of the primary metabolism such as CoA derivatives and acetyl-acyl carrier proteins of fatty acid synthesis were also not significantly hydrolyzed, as investigated with TEII(srf). These findings support a model in which the physiological role of TEIIs in nonribosomal peptide synthesis is the regeneration of misacylated NRPS, which result from the apo to holo conversion of NRPS enzymes because of the promiscuity of dedicated 4'PP transferases that use not only free CoA, but also acyl-CoAs as 4'PP donors.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12384573      PMCID: PMC137840          DOI: 10.1073/pnas.212382199

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  Role of type II thioesterases: evidence for removal of short acyl chains produced by aberrant decarboxylation of chain extender units.

Authors:  M L Heathcote; J Staunton; P F Leadlay
Journal:  Chem Biol       Date:  2001-02

2.  Modular Peptide Synthetases Involved in Nonribosomal Peptide Synthesis.

Authors:  Mohamed A. Marahiel; Torsten Stachelhaus; Henning D. Mootz
Journal:  Chem Rev       Date:  1997-11-10       Impact factor: 60.622

3.  Generality of peptide cyclization catalyzed by isolated thioesterase domains of nonribosomal peptide synthetases.

Authors:  R M Kohli; J W Trauger; D Schwarzer; M A Marahiel; C T Walsh
Journal:  Biochemistry       Date:  2001-06-19       Impact factor: 3.162

4.  The tyrocidine biosynthesis operon of Bacillus brevis: complete nucleotide sequence and biochemical characterization of functional internal adenylation domains.

Authors:  H D Mootz; M A Marahiel
Journal:  J Bacteriol       Date:  1997-11       Impact factor: 3.490

5.  Genetic evidence for a role of thioesterase domains, integrated in or associated with peptide synthetases, in non-ribosomal peptide biosynthesis in Bacillus subtilis.

Authors:  A Schneider; M A Marahiel
Journal:  Arch Microbiol       Date:  1998-05       Impact factor: 2.552

6.  Exploring the impact of different thioesterase domains for the design of hybrid peptide synthetases.

Authors:  D Schwarzer; H D Mootz; M A Marahiel
Journal:  Chem Biol       Date:  2001-10

7.  Reassessment of Ellman's reagent.

Authors:  P W Riddles; R L Blakeley; B Zerner
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

8.  Characterization of the angR gene of Vibrio anguillarum: essential role in virulence.

Authors:  A M Wertheimer; W Verweij; Q Chen; L M Crosa; M Nagasawa; M E Tolmasky; L A Actis; J H Crosa
Journal:  Infect Immun       Date:  1999-12       Impact factor: 3.441

9.  Impact of thioesterase activity on tylosin biosynthesis in Streptomyces fradiae.

Authors:  A R Butler; N Bate; E Cundliffe
Journal:  Chem Biol       Date:  1999-05

10.  Isolation and properties of acyl carrier protein phosphodiesterase of Escherichia coli.

Authors:  A S Fischl; E P Kennedy
Journal:  J Bacteriol       Date:  1990-09       Impact factor: 3.490

View more
  57 in total

1.  PchC thioesterase optimizes nonribosomal biosynthesis of the peptide siderophore pyochelin in Pseudomonas aeruginosa.

Authors:  Cornelia Reimmann; Hiten M Patel; Christopher T Walsh; Dieter Haas
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

2.  Identification of nocobactin NA biosynthetic gene clusters in Nocardia farcinica.

Authors:  Yasutaka Hoshino; Kazuhiro Chiba; Keiko Ishino; Toshio Fukai; Yasuhiro Igarashi; Katsukiyo Yazawa; Yuzuru Mikami; Jun Ishikawa
Journal:  J Bacteriol       Date:  2010-11-19       Impact factor: 3.490

3.  Parallel interrogation of covalent intermediates in the biosynthesis of gramicidin S using high-resolution mass spectrometry.

Authors:  Leah M Miller; Matthew T Mazur; Shaun M McLoughlin; Neil L Kelleher
Journal:  Protein Sci       Date:  2005-10       Impact factor: 6.725

4.  The hotdog thioesterase EntH (YbdB) plays a role in vivo in optimal enterobactin biosynthesis by interacting with the ArCP domain of EntB.

Authors:  Damien Leduc; Aurélia Battesti; Emmanuelle Bouveret
Journal:  J Bacteriol       Date:  2007-08-03       Impact factor: 3.490

5.  Biosynthetic gene cluster for the polyenoyltetramic acid alpha-lipomycin.

Authors:  C Bihlmaier; E Welle; C Hofmann; K Welzel; A Vente; E Breitling; M Müller; S Glaser; A Bechthold
Journal:  Antimicrob Agents Chemother       Date:  2006-06       Impact factor: 5.191

6.  Structure and functional analysis of RifR, the type II thioesterase from the rifamycin biosynthetic pathway.

Authors:  Heather B Claxton; David L Akey; Monica K Silver; Suzanne J Admiraal; Janet L Smith
Journal:  J Biol Chem       Date:  2008-12-22       Impact factor: 5.157

7.  Biosynthetic gene cluster of the herbicide phosphinothricin tripeptide from Streptomyces viridochromogenes Tü494.

Authors:  Dirk Schwartz; Susanne Berger; Eva Heinzelmann; Konstanze Muschko; Kathrin Welzel; Wolfgang Wohlleben
Journal:  Appl Environ Microbiol       Date:  2004-12       Impact factor: 4.792

8.  Type II thioesterase ScoT, associated with Streptomyces coelicolor A3(2) modular polyketide synthase Cpk, hydrolyzes acyl residues and has a preference for propionate.

Authors:  Magdalena Kotowska; Krzysztof Pawlik; Aleksandra Smulczyk-Krawczyszyn; Hubert Bartosz-Bechowski; Katarzyna Kuczek
Journal:  Appl Environ Microbiol       Date:  2008-12-12       Impact factor: 4.792

9.  The erythromycin biosynthetic gene cluster of Aeromicrobium erythreum.

Authors:  Igor A Brikun; Andrew R Reeves; William H Cernota; Minh B Luu; J Mark Weber
Journal:  J Ind Microbiol Biotechnol       Date:  2004-07-15       Impact factor: 3.346

10.  YbtT is a low-specificity type II thioesterase that maintains production of the metallophore yersiniabactin in pathogenic enterobacteria.

Authors:  Shannon I Ohlemacher; Yiquan Xu; Daniel L Kober; Mahnoor Malik; Jay C Nix; Tom J Brett; Jeffrey P Henderson
Journal:  J Biol Chem       Date:  2018-10-24       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.