Literature DB >> 19117456

Dynamic biochemical information recovery in spontaneous human seminal fluid reactions via 1H NMR kinetic statistical total correlation spectroscopy.

Anthony D Maher1, Olivier Cloarec, Prasad Patki, Michael Craggs, Elaine Holmes, John C Lindon, Jeremy K Nicholson.   

Abstract

Human seminal fluid (HSF) is a complex mixture of reacting glandular metabolite and protein secretions that provides critical support functions in fertilization. We have employed 600-MHz (1)H NMR spectroscopy to compare and contrast the temporal biochemical and biophysical changes in HSF from infertile men with spinal cord injury compared to age-matched controls. We have developed new approaches to data analysis and visualization to facilitate the interpretation of the results, including the first application of the recently published K-STOCSY concept to a biofluid, enhancing the extraction of information on biochemically related metabolites and assignment of resonances from the major seminal protein, semenogelin. Principal components analysis was also applied to evaluate the extent to which macromolecules influence the overall variation in the metabolic data set. The K-STOCSY concept was utilized further to determine the relationships between reaction rates and metabolite levels, revealing that choline, N-acetylglucosamine, and uridine are associated with higher peptidase activity. The novel approach adopted here has the potential to capture dynamic information in any complex mixture of reacting chemicals including other biofluids or cell extracts.

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Year:  2009        PMID: 19117456     DOI: 10.1021/ac801993m

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  8 in total

Review 1.  NMR-spectroscopic analysis of mixtures: from structure to function.

Authors:  Ry R Forseth; Frank C Schroeder
Journal:  Curr Opin Chem Biol       Date:  2010-11-09       Impact factor: 8.822

Review 2.  Advances in NMR-based biofluid analysis and metabolite profiling.

Authors:  Shucha Zhang; G A Nagana Gowda; Tao Ye; Daniel Raftery
Journal:  Analyst       Date:  2010-04-09       Impact factor: 4.616

3.  Identification of biochemical differences between different forms of male infertility by nuclear magnetic resonance (NMR) spectroscopy.

Authors:  Varshini Jayaraman; Soumita Ghosh; Arjun Sengupta; Sudha Srivastava; H M Sonawat; Pratap Kumar Narayan
Journal:  J Assist Reprod Genet       Date:  2014-06-26       Impact factor: 3.412

4.  Metabolic response to exogenous ethanol in yeast: an in vivo statistical total correlation NMR spectroscopy approach.

Authors:  Maso Ricci; Marianna Aggravi; Claudia Bonechi; Silvia Martini; Anna Maria Aloisi; Claudio Rossi
Journal:  J Biosci       Date:  2012-09       Impact factor: 1.826

Review 5.  Precision Oncology via NMR-Based Metabolomics: A Review on Breast Cancer.

Authors:  Alessia Vignoli; Emanuela Risi; Amelia McCartney; Ilenia Migliaccio; Erica Moretti; Luca Malorni; Claudio Luchinat; Laura Biganzoli; Leonardo Tenori
Journal:  Int J Mol Sci       Date:  2021-04-28       Impact factor: 5.923

6.  The Investigation of Metabonomic Pathways of Serum of Iranian Women with Recurrent Miscarriage Using 1H NMR.

Authors:  Mahbobeh Latifimehr; Ali Asghar Rastegari; Zahra Zamani; Pezhman Fard Esfahani; Leila Nazari
Journal:  Biomed Res Int       Date:  2021-11-03       Impact factor: 3.411

Review 7.  A metabolomic perspective on coeliac disease.

Authors:  Antonio Calabrò; Ewa Gralka; Claudio Luchinat; Edoardo Saccenti; Leonardo Tenori
Journal:  Autoimmune Dis       Date:  2014-02-09

8.  Chemical Diversity and Complexity of Scotch Whisky as Revealed by High-Resolution Mass Spectrometry.

Authors:  Will Kew; Ian Goodall; David Clarke; Dušan Uhrín
Journal:  J Am Soc Mass Spectrom       Date:  2016-10-17       Impact factor: 3.109

  8 in total

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