Literature DB >> 19105691

Selective recognition of protein tetraserine motifs with a cell-permeable, pro-fluorescent bis-boronic acid.

Tiffany L Halo1, Jacob Appelbaum, Elissa M Hobert, Daniel M Balkin, Alanna Schepartz.   

Abstract

There is considerable interest in novel cell imaging tools that avoid the use of fluorescent proteins. One widely used class of such reagents are "pro-fluorescent" biarsenical dyes such as FlAsH, ReAsH, CrAsH, and Cy3As. Despite their utility, biarsenicals are plagued by high background labeling and cytotoxicity and are challenging to apply in oxidizing cellular locale. Here we demonstrate that [(3-oxospiro[isobenzofuran-1(3H),9'-[9H]xanthene]-3',6'-diyl)bis(iminomethylene-2,1-phenylene)]bis-(9CI), a rhodamine-derived bisboronic acid (RhoBo) described initially as a monosaccharide sensor, functions as a cell-permeable, turn-on fluorescent sensor for tetraserine motifs in recombinant proteins. RhoBo binds peptides or proteins containing Ser-Ser-Pro-Gly-Ser-Ser with affinities in the nanomolar concentration range and prefers this sequence to simple monosaccharides by >10,000-fold. RhoBo fails to form fluorescent complexes with constituents of the mammalian cell surface, as judged by epifluorescent, confocal, and TIRF microscopy, but fluoresces brightly within the Ser-Ser-Pro-Gly-Ser-Ser-rich cell interior. These results suggest that current efforts to identify optimal serine-rich sequences for RhoBo will allow it to function effectively as a selective small-molecule label for appropriately tagged proteins either upon or within living cells.

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Year:  2009        PMID: 19105691      PMCID: PMC2659559          DOI: 10.1021/ja807872s

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  16 in total

1.  Fluorescent labeling of recombinant proteins in living cells with FlAsH.

Authors:  B A Griffin; S R Adams; J Jones; R Y Tsien
Journal:  Methods Enzymol       Date:  2000       Impact factor: 1.600

2.  Postcolumn HPLC detection of mono- and oligosaccharides with a chemosensor.

Authors:  Kyu Kwang Kim; Jorge O Escobedo; Nadia N St Luce; Oleksandr Rusin; Douglas Wong; Robert M Strongin
Journal:  Org Lett       Date:  2003-12-25       Impact factor: 6.005

3.  CrAsH: a biarsenical multi-use affinity probe with low non-specific fluorescence.

Authors:  Haishi Cao; Baowei Chen; Thomas C Squier; M Uljana Mayer
Journal:  Chem Commun (Camb)       Date:  2006-05-17       Impact factor: 6.222

4.  Surveying polypeptide and protein domain conformation and association with FlAsH and ReAsH.

Authors:  Nathan W Luedtke; Rachel J Dexter; Daniel B Fried; Alanna Schepartz
Journal:  Nat Chem Biol       Date:  2007-11-04       Impact factor: 15.040

5.  A red cy3-based biarsenical fluorescent probe targeted to a complementary binding peptide.

Authors:  Haishi Cao; Yijia Xiong; Ting Wang; Baowei Chen; Thomas C Squier; M Uljana Mayer
Journal:  J Am Chem Soc       Date:  2007-06-22       Impact factor: 15.419

6.  Accumulation of FlAsH/Lumio Green in active mitochondria can be reversed by beta-mercaptoethanol for specific staining of tetracysteine-tagged proteins.

Authors:  Matthias F Langhorst; Selda Genisyuerek; Claudia A O Stuermer
Journal:  Histochem Cell Biol       Date:  2006-01-04       Impact factor: 4.304

Review 7.  Selective labeling of proteins with chemical probes in living cells.

Authors:  Michael Z Lin; Lei Wang
Journal:  Physiology (Bethesda)       Date:  2008-06

8.  The protein-labeling reagent FLASH-EDT2 binds not only to CCXXCC motifs but also non-specifically to endogenous cysteine-rich proteins.

Authors:  K Stroffekova; C Proenza; K G Beam
Journal:  Pflugers Arch       Date:  2001-09       Impact factor: 3.657

9.  Golgi twins in late mitosis revealed by genetically encoded tags for live cell imaging and correlated electron microscopy.

Authors:  Guido M Gaietta; Ben N G Giepmans; Thomas J Deerinck; W Bryan Smith; Lucy Ngan; Juan Llopis; Stephen R Adams; Roger Y Tsien; Mark H Ellisman
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-13       Impact factor: 11.205

10.  Exploring the structural diversity of mammalian carbohydrates ("glycospace") by statistical databank analysis.

Authors:  Daniel B Werz; René Ranzinger; Stephan Herget; Alexander Adibekian; Claus-Wilhelm von der Lieth; Peter H Seeberger
Journal:  ACS Chem Biol       Date:  2007-10-19       Impact factor: 5.100

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  35 in total

1.  Peptide tag forming a rapid covalent bond to a protein, through engineering a bacterial adhesin.

Authors:  Bijan Zakeri; Jacob O Fierer; Emrah Celik; Emily C Chittock; Ulrich Schwarz-Linek; Vincent T Moy; Mark Howarth
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-24       Impact factor: 11.205

Review 2.  Designer proteins: applications of genetic code expansion in cell biology.

Authors:  Lloyd Davis; Jason W Chin
Journal:  Nat Rev Mol Cell Biol       Date:  2012-02-15       Impact factor: 94.444

3.  Genetically encoded tetrazine amino acid directs rapid site-specific in vivo bioorthogonal ligation with trans-cyclooctenes.

Authors:  Jason L Seitchik; Jennifer C Peeler; Michael T Taylor; Melissa L Blackman; Timothy W Rhoads; Richard B Cooley; Christian Refakis; Joseph M Fox; Ryan A Mehl
Journal:  J Am Chem Soc       Date:  2012-02-01       Impact factor: 15.419

4.  Genetically programmed chiral organoborane synthesis.

Authors:  S B Jennifer Kan; Xiongyi Huang; Yosephine Gumulya; Kai Chen; Frances H Arnold
Journal:  Nature       Date:  2017-11-29       Impact factor: 49.962

5.  Boronic acids as tools to study (plant) developmental processes?

Authors:  Michaela Matthes; Ramón A Torres-Ruiz
Journal:  Plant Signal Behav       Date:  2017-04-27

6.  Genetically encoded norbornene directs site-specific cellular protein labelling via a rapid bioorthogonal reaction.

Authors:  Kathrin Lang; Lloyd Davis; Jessica Torres-Kolbus; Chungjung Chou; Alexander Deiters; Jason W Chin
Journal:  Nat Chem       Date:  2012-02-05       Impact factor: 24.427

Review 7.  Advances in chemical labeling of proteins in living cells.

Authors:  Qi Yan; Marcel P Bruchez
Journal:  Cell Tissue Res       Date:  2015-03-07       Impact factor: 5.249

Review 8.  Boron chemicals in diagnosis and therapeutics.

Authors:  Bhaskar C Das; Pritam Thapa; Radha Karki; Caroline Schinke; Sasmita Das; Suman Kambhampati; Sushanta K Banerjee; Peter Van Veldhuizen; Amit Verma; Louis M Weiss; Todd Evans
Journal:  Future Med Chem       Date:  2013-04       Impact factor: 3.808

9.  Photoinitiated release of an aziridinium ion precursor for the temporally controlled alkylation of nucleophiles.

Authors:  Stephen T McCarron; Mariel Feliciano; Jeffreys N Johnson; James J Chambers
Journal:  Bioorg Med Chem Lett       Date:  2013-02-21       Impact factor: 2.823

10.  A biocompatible condensation reaction for the labeling of terminal cysteine residues on proteins.

Authors:  Hongjun Ren; Fei Xiao; Ke Zhan; Young-Pil Kim; Hexin Xie; Zuyong Xia; Jianghong Rao
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

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