Literature DB >> 19100655

DNA barcoding for ecologists.

Alice Valentini1, François Pompanon, Pierre Taberlet.   

Abstract

DNA barcoding - taxon identification using a standardized DNA region - has received much attention recently, and is being further developed through an international initiative. We anticipate that DNA barcoding techniques will be increasingly used by ecologists. They will be able to not only identify a single species from a specimen or an organism's remains but also determine the species composition of environmental samples. Short DNA fragments persist in the environment and might allow an assessment of local biodiversity from soil or water. Even DNA-based diet composition can be estimated using fecal samples. Here we review the new avenues offered to ecologists by DNA barcoding, particularly in the context of new sequencing technologies.

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Year:  2008        PMID: 19100655     DOI: 10.1016/j.tree.2008.09.011

Source DB:  PubMed          Journal:  Trends Ecol Evol        ISSN: 0169-5347            Impact factor:   17.712


  190 in total

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4.  First detection of prey DNA in Hygrobates fluviatilis (Hydrachnidia, Acari): a new approach for determining predator-prey relationships in water mites.

Authors:  P Martin; M Koester; L Schynawa; R Gergs
Journal:  Exp Appl Acarol       Date:  2015-08-06       Impact factor: 2.132

5.  Response of forest soil euglyphid testate amoebae (Rhizaria: Cercozoa) to pig cadavers assessed by high-throughput sequencing.

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Authors:  Qing-Qing Li; Di-Yan Li; Hui Ye; Xiao-Fei Liu; Wei Shi; Neng Cao; Yan-Qing Duan
Journal:  Mol Biol Rep       Date:  2010-12-23       Impact factor: 2.316

7.  The nuclear 28S gene fragment D3 as species marker in oribatid mites (Acari, Oribatida) from German peatlands.

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Review 8.  20 years since the introduction of DNA barcoding: from theory to application.

Authors:  Živa Fišer Pečnikar; Elena V Buzan
Journal:  J Appl Genet       Date:  2013-11-08       Impact factor: 3.240

9.  A DNA barcode for land plants.

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Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-30       Impact factor: 11.205

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Journal:  Fly (Austin)       Date:  2013-03-04       Impact factor: 2.160

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