Literature DB >> 19072330

Structural and dynamic study of the tetramerization region of non-erythroid alpha-spectrin: a frayed helix revealed by site-directed spin labeling electron paramagnetic resonance.

Qufei Li1, L W-M Fung.   

Abstract

The N-terminal region of alpha-spectrin is responsible for its association with beta-spectrin in a heterodimer, forming functional tetramers. Non-erythroid alpha-spectrin (alphaII-spectrin) has a significantly higher association affinity for beta-spectrin than the homologous erythroid alpha-spectrin (alphaI-spectrin). We have previously determined the solution structure of the N-terminal region of alphaI-spectrin by NMR methods, but currently no structural information is available for alphaII-spectrin. We have used cysteine scanning, spin labeling electron paramagnetic resonance (EPR), and isothermal titration calorimetry (ITC) methods to study the tetramerization region of alphaII-spectrin. EPR data clearly show that, in alphaII-spectrin, the first nine N-terminal residues were unstructured, followed by an irregular helix (helix C'), frayed at the N-terminal end, but rigid at the C-terminal end, which merges into the putative triple-helical structural domain. The region corresponding to the important unstructured junction region linking helix C' to the first structural domain in alphaI-spectrin was clearly structured. On the basis of the published model for aligning helices A', B', and C', important interactions among residues in helix C' of alphaI- and alphaII-spectrin and helices A' and B' of betaI- and betaII-spectrin are identified, suggesting similar coiled coil helical bundling for spectrin I and II in forming tetramers. The differences in affinity are likely due to the differences in the conformation of the junction regions. Equilibrium dissociation constants of spin-labeled alphaII and betaI complexes from ITC measurements indicate that residues 15, 19, 37, and 40 are functionally important residues in alphaII-spectrin. Interestingly, all four corresponding homologous residues in alphaI-spectrin (residues 24, 28, 46, and 49) have been reported to be clinically significant residues involved in hematological diseases.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19072330      PMCID: PMC2649756          DOI: 10.1021/bi8013032

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  56 in total

1.  Spin label EPR structural studies of the N-terminus of alpha-spectrin.

Authors:  L Cherry; N Menhart; L W Fung
Journal:  FEBS Lett       Date:  2000-01-28       Impact factor: 4.124

Review 2.  Spectrin and ankyrin-based pathways: metazoan inventions for integrating cells into tissues.

Authors:  V Bennett; A J Baines
Journal:  Physiol Rev       Date:  2001-07       Impact factor: 37.312

3.  Folding of small helical proteins assisted by small-angle X-ray scattering profiles.

Authors:  Yinghao Wu; Xia Tian; Mingyang Lu; Mingzhi Chen; Qinghua Wang; Jianpeng Ma
Journal:  Structure       Date:  2005-11       Impact factor: 5.006

4.  Statistical analysis of intrahelical ionic interactions in alpha-helices and coiled coils.

Authors:  Markus Meier; Peter Burkhard
Journal:  J Struct Biol       Date:  2006-05-16       Impact factor: 2.867

5.  Spectrin domains lose cooperativity in forced unfolding.

Authors:  Lucy G Randles; Ross W S Rounsevell; Jane Clarke
Journal:  Biophys J       Date:  2006-11-03       Impact factor: 4.033

6.  Spectrin breakdown products in the cerebrospinal fluid in severe head injury--preliminary observations.

Authors:  O Farkas; B Polgár; J Szekeres-Barthó; T Dóczi; J T Povlishock; A Büki
Journal:  Acta Neurochir (Wien)       Date:  2005-06-09       Impact factor: 2.216

7.  Location of the human red cell spectrin tetramer binding site and detection of a related "closed" hairpin loop dimer using proteolytic footprinting.

Authors:  D W Speicher; T M DeSilva; K D Speicher; J A Ursitti; P Hembach; L Weglarz
Journal:  J Biol Chem       Date:  1993-02-25       Impact factor: 5.157

8.  Crystal structure of the repetitive segments of spectrin.

Authors:  Y Yan; E Winograd; A Viel; T Cronin; S C Harrison; D Branton
Journal:  Science       Date:  1993-12-24       Impact factor: 47.728

9.  Structural and functional effects of hereditary hemolytic anemia-associated point mutations in the alpha spectrin tetramer site.

Authors:  Massimiliano Gaetani; Sara Mootien; Sandra Harper; Patrick G Gallagher; David W Speicher
Journal:  Blood       Date:  2008-01-24       Impact factor: 22.113

10.  Small deletions disturb desmin architecture leading to breakdown of muscle cells and development of skeletal or cardioskeletal myopathy.

Authors:  Anna Kaminska; Sergei V Strelkov; Bertrand Goudeau; Montse Olivé; Ayush Dagvadorj; Anna Fidzianska; Monique Simon-Casteras; Alexey Shatunov; Marinos C Dalakas; Isidro Ferrer; Hubert Kwiecinski; Patrick Vicart; Lev G Goldfarb
Journal:  Hum Genet       Date:  2003-11-27       Impact factor: 4.132

View more
  12 in total

1.  Organization and dynamics of tryptophan residues in brain spectrin: novel insight into conformational flexibility.

Authors:  Madhurima Mitra; Arunima Chaudhuri; Malay Patra; Chaitali Mukhopadhyay; Abhijit Chakrabarti; Amitabha Chattopadhyay
Journal:  J Fluoresc       Date:  2015-04-03       Impact factor: 2.217

Review 2.  SDSL-ESR-based protein structure characterization.

Authors:  Janez Strancar; Aleh Kavalenka; Iztok Urbancic; Ajasja Ljubetic; Marcus A Hemminga
Journal:  Eur Biophys J       Date:  2009-08-11       Impact factor: 1.733

3.  Crystal structure of the nonerythroid alpha-spectrin tetramerization site reveals differences between erythroid and nonerythroid spectrin tetramer formation.

Authors:  Shahila Mehboob; Yuanli Song; Marta Witek; Fei Long; Bernard D Santarsiero; Michael E Johnson; Leslie W-M Fung
Journal:  J Biol Chem       Date:  2010-03-14       Impact factor: 5.157

4.  Apparent structural differences at the tetramerization region of erythroid and nonerythroid beta spectrin as discriminated by phage displayed scFvs.

Authors:  Yuanli Song; Chloe Antoniou; Adnan Memic; Brian K Kay; L W-M Fung
Journal:  Protein Sci       Date:  2011-03-30       Impact factor: 6.725

5.  The L49F mutation in alpha erythroid spectrin induces local disorder in the tetramer association region: Fluorescence and molecular dynamics studies of free and bound alpha spectrin.

Authors:  Yuanli Song; Nina H Pipalia; L W-M Fung
Journal:  Protein Sci       Date:  2009-09       Impact factor: 6.725

6.  Expression, purification, and reconstitution of the voltage-sensing domain from Ci-VSP.

Authors:  Qufei Li; Vishwanath Jogini; Sherry Wanderling; D Marien Cortes; Eduardo Perozo
Journal:  Biochemistry       Date:  2012-10-05       Impact factor: 3.162

7.  Association studies of erythroid alpha-spectrin at the tetramerization site.

Authors:  Vinh Q Lam; Chloe Antoniou; Ramunas Rolius; Leslie W-M Fung
Journal:  Br J Haematol       Date:  2009-08-31       Impact factor: 6.998

8.  Quantitative studies of caspase-3 catalyzed αII-spectrin breakdown.

Authors:  Marta A Witek; L W-M Fung
Journal:  Brain Res       Date:  2013-08-12       Impact factor: 3.252

9.  Inhibition of calpain but not caspase activity by spectrin fragments.

Authors:  Ramunas Rolius; Chloe Antoniou; Lidia A Nazarova; Stephen H Kim; Garrett Cobb; Pooja Gala; Priyanka Rajaram; Qufei Li; Leslie W-M Fung
Journal:  Cell Mol Biol Lett       Date:  2010-05-14       Impact factor: 5.787

10.  Important residue (G46) in erythroid spectrin tetramer formation.

Authors:  Jianxia Kang; Yuanli Song; Akin Sevinc; Leslie W-M Fung
Journal:  Cell Mol Biol Lett       Date:  2009-09-08       Impact factor: 5.787

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.