Literature DB >> 17085494

Spectrin domains lose cooperativity in forced unfolding.

Lucy G Randles1, Ross W S Rounsevell, Jane Clarke.   

Abstract

Spectrin is a multidomain cytoskeletal protein, the component three-helix bundle domains are expected to experience mechanical force in vivo. In thermodynamic and kinetic studies, neighboring domains of chicken brain alpha-spectrin R16 and R17 have been shown to behave cooperatively. Is this cooperativity maintained under force? The effect of force on these spectrin domains was investigated using atomic force microscopy. The response of the individual domains to force was compared to that of the tandem repeat R1617. Importantly, nonhelical linkers (all-beta immunoglobulin domains) were used to avoid formation of nonnative helical linkers. We show that, in contrast to previous studies on spectrin repeats, only 3% of R1617 unfolding events gave an increase in contour length consistent with cooperative two-domain unfolding events. Furthermore, the unfolding forces for R1617 were the same as those for the unfolding of R16 or R17 alone. This is a strong indication that the cooperative unfolding behavior observed in the stopped-flow studies is absent between these spectrin domains when force is acting as a denaturant. Our evidence suggests that the rare double unfolding events result from misfolding between adjacent repeats. We suggest that this switch from cooperative to independent behavior allows multidomain proteins to maintain integrity under applied force.

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Year:  2006        PMID: 17085494      PMCID: PMC1751415          DOI: 10.1529/biophysj.106.093690

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  44 in total

1.  Free energies of urea and of thermal unfolding show that two tandem repeats of spectrin are thermodynamically more stable than a single repeat.

Authors:  R I MacDonald; E V Pozharski
Journal:  Biochemistry       Date:  2001-04-03       Impact factor: 3.162

2.  Biophysical investigations of engineered polyproteins: implications for force data.

Authors:  Ross W S Rounsevell; Annette Steward; Jane Clarke
Journal:  Biophys J       Date:  2004-12-21       Impact factor: 4.033

3.  The folding of spectrin domains II: phi-value analysis of R16.

Authors:  Kathryn A Scott; Lucy G Randles; Jane Clarke
Journal:  J Mol Biol       Date:  2004-11-12       Impact factor: 5.469

4.  The importance of sequence diversity in the aggregation and evolution of proteins.

Authors:  Caroline F Wright; Sarah A Teichmann; Jane Clarke; Christopher M Dobson
Journal:  Nature       Date:  2005-12-08       Impact factor: 49.962

5.  Spectrin R16: broad energy barrier or sequential transition states?

Authors:  Kathryn A Scott; Jane Clarke
Journal:  Protein Sci       Date:  2005-06       Impact factor: 6.725

6.  The folding pathway of spectrin R17 from experiment and simulation: using experimentally validated MD simulations to characterize States hinted at by experiment.

Authors:  Kathryn A Scott; Lucy G Randles; Stephen J Moran; Valerie Daggett; Jane Clarke
Journal:  J Mol Biol       Date:  2006-03-21       Impact factor: 5.469

7.  The molecular elasticity of the extracellular matrix protein tenascin.

Authors:  A F Oberhauser; P E Marszalek; H P Erickson; J M Fernandez
Journal:  Nature       Date:  1998-05-14       Impact factor: 49.962

8.  Erythrocyte spectrin is comprised of many homologous triple helical segments.

Authors:  D W Speicher; V T Marchesi
Journal:  Nature       Date:  1984 Sep 13-19       Impact factor: 49.962

Review 9.  Over-production of proteins in Escherichia coli: mutant hosts that allow synthesis of some membrane proteins and globular proteins at high levels.

Authors:  B Miroux; J E Walker
Journal:  J Mol Biol       Date:  1996-07-19       Impact factor: 5.469

10.  Phasing the conformational unit of spectrin.

Authors:  E Winograd; D Hume; D Branton
Journal:  Proc Natl Acad Sci U S A       Date:  1991-12-01       Impact factor: 11.205

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  20 in total

1.  Orientation-based FRET sensor for real-time imaging of cellular forces.

Authors:  Fanjie Meng; Frederick Sachs
Journal:  J Cell Sci       Date:  2012-02-01       Impact factor: 5.285

2.  Mechanical anisotropy of ankyrin repeats.

Authors:  Whasil Lee; Xiancheng Zeng; Kristina Rotolo; Ming Yang; Christopher J Schofield; Vann Bennett; Weitao Yang; Piotr E Marszalek
Journal:  Biophys J       Date:  2012-03-06       Impact factor: 4.033

3.  A novel strain energy relationship for red blood cell membrane skeleton based on spectrin stiffness and its application to micropipette deformation.

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Journal:  Biomech Model Mechanobiol       Date:  2015-09-16

4.  Forced unfolding of proteins within cells.

Authors:  Colin P Johnson; Hsin-Yao Tang; Christine Carag; David W Speicher; Dennis E Discher
Journal:  Science       Date:  2007-08-03       Impact factor: 47.728

5.  Distinguishing specific and nonspecific interdomain interactions in multidomain proteins.

Authors:  Lucy G Randles; Sarah Batey; Annette Steward; Jane Clarke
Journal:  Biophys J       Date:  2007-09-21       Impact factor: 4.033

6.  Inhibitor binding increases the mechanical stability of staphylococcal nuclease.

Authors:  Chien-Chung Wang; Tian-Yow Tsong; Yau-Heiu Hsu; Piotr E Marszalek
Journal:  Biophys J       Date:  2011-02-16       Impact factor: 4.033

7.  Protein misfolding occurs by slow diffusion across multiple barriers in a rough energy landscape.

Authors:  Hao Yu; Derek R Dee; Xia Liu; Angela M Brigley; Iveta Sosova; Michael T Woodside
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-24       Impact factor: 11.205

8.  The nesprin-cytoskeleton interface probed directly on single nuclei is a mechanically rich system.

Authors:  Daniel A Balikov; Sonia K Brady; Ung Hyun Ko; Jennifer H Shin; Jose M de Pereda; Arnoud Sonnenberg; Hak-Joon Sung; Matthew J Lang
Journal:  Nucleus       Date:  2017-06-22       Impact factor: 4.197

9.  Structural and dynamic study of the tetramerization region of non-erythroid alpha-spectrin: a frayed helix revealed by site-directed spin labeling electron paramagnetic resonance.

Authors:  Qufei Li; L W-M Fung
Journal:  Biochemistry       Date:  2009-01-13       Impact factor: 3.162

Review 10.  Conformational changes and signaling in cell and matrix physics.

Authors:  André E X Brown; Dennis E Discher
Journal:  Curr Biol       Date:  2009-09-15       Impact factor: 10.834

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