Literature DB >> 19054740

Conditions for gene disruption by homologous recombination of exogenous DNA into the Sulfolobus solfataricus genome.

Sonja-Verena Albers1, Arnold J M Driessen.   

Abstract

The construction of directed gene deletion mutants is an essential tool in molecular biology that allows functional studies on the role of genes in their natural environment. For hyperthermophilic archaea, it has been difficult to obtain a reliable system to construct such mutants. However, during the past years, systems have been developed for Thermococcus kodakarensis and two Sulfolobus species, S. acidocaldarius and derivatives of S. solfataricus 98/2. Here we describe an optimization of the method for integration of exogenous DNA into S. solfataricus PBL 2025, an S. solfataricus 98/2 derivative, based on lactose auxotrophy that now allows for routine gene inactivation.

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Year:  2008        PMID: 19054740      PMCID: PMC2685593          DOI: 10.1155/2008/948014

Source DB:  PubMed          Journal:  Archaea            Impact factor:   3.273


  18 in total

1.  Production of recombinant and tagged proteins in the hyperthermophilic archaeon Sulfolobus solfataricus.

Authors:  S-V Albers; M Jonuscheit; S Dinkelaker; T Urich; A Kletzin; R Tampé; A J M Driessen; C Schleper
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

2.  Analysis of ATPases of putative secretion operons in the thermoacidophilic archaeon Sulfolobus solfataricus.

Authors:  Sonja-Verena Albers; Arnold J M Driessen
Journal:  Microbiology (Reading)       Date:  2005-03       Impact factor: 2.777

3.  Improved and versatile transformation system allowing multiple genetic manipulations of the hyperthermophilic archaeon Thermococcus kodakaraensis.

Authors:  Takaaki Sato; Toshiaki Fukui; Haruyuki Atomi; Tadayuki Imanaka
Journal:  Appl Environ Microbiol       Date:  2005-07       Impact factor: 4.792

4.  Sister chromatid junctions in the hyperthermophilic archaeon Sulfolobus solfataricus.

Authors:  Nicholas P Robinson; Katherine A Blood; Simon A McCallum; Paul A W Edwards; Stephen D Bell
Journal:  EMBO J       Date:  2007-01-25       Impact factor: 11.598

5.  Cell cycle characteristics of thermophilic archaea.

Authors:  R Bernander; A Poplawski
Journal:  J Bacteriol       Date:  1997-08       Impact factor: 3.490

6.  Genetic requirements for the function of the archaeal virus SSV1 in Sulfolobus solfataricus: construction and testing of viral shuttle vectors.

Authors:  K M Stedman; C Schleper; E Rumpf; W Zillig
Journal:  Genetics       Date:  1999-08       Impact factor: 4.562

7.  Homologous recombination of exogenous DNA with the Sulfolobus acidocaldarius genome: properties and uses.

Authors:  Norio Kurosawa; Dennis W Grogan
Journal:  FEMS Microbiol Lett       Date:  2005-10-11       Impact factor: 2.742

8.  Regulation of expression of the arabinose and glucose transporter genes in the thermophilic archaeon Sulfolobus solfataricus.

Authors:  Joanna M Lubelska; Melanie Jonuscheit; Christa Schleper; Sonja-Verena Albers; Arnold J M Driessen
Journal:  Extremophiles       Date:  2006-04-08       Impact factor: 2.395

9.  Identification of a system required for the functional surface localization of sugar binding proteins with class III signal peptides in Sulfolobus solfataricus.

Authors:  Behnam Zolghadr; Stefan Weber; Zalán Szabó; Arnold J M Driessen; Sonja-Verena Albers
Journal:  Mol Microbiol       Date:  2007-05       Impact factor: 3.501

10.  A spreadable, non-integrative and high copy number shuttle vector for Sulfolobus solfataricus based on the genetic element pSSVx from Sulfolobus islandicus.

Authors:  Tiziana Aucelli; Patrizia Contursi; Michele Girfoglio; Mosè Rossi; Raffaele Cannio
Journal:  Nucleic Acids Res       Date:  2006-09-13       Impact factor: 16.971

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  27 in total

1.  A synthetic arabinose-inducible promoter confers high levels of recombinant protein expression in hyperthermophilic archaeon Sulfolobus islandicus.

Authors:  Nan Peng; Ling Deng; Yuxia Mei; Dongqing Jiang; Yongmei Hu; Mariana Awayez; Yunxiang Liang; Qunxin She
Journal:  Appl Environ Microbiol       Date:  2012-06-01       Impact factor: 4.792

2.  Thermococcus kodakarensis as a host for gene expression and protein secretion.

Authors:  Ryo Takemasa; Yuusuke Yokooji; Atsushi Yamatsu; Haruyuki Atomi; Tadayuki Imanaka
Journal:  Appl Environ Microbiol       Date:  2011-01-28       Impact factor: 4.792

Review 3.  Life in hot acid: pathway analyses in extremely thermoacidophilic archaea.

Authors:  Kathryne S Auernik; Charlotte R Cooper; Robert M Kelly
Journal:  Curr Opin Biotechnol       Date:  2008-09-11       Impact factor: 9.740

Review 4.  An overview of 25 years of research on Thermococcus kodakarensis, a genetically versatile model organism for archaeal research.

Authors:  Naeem Rashid; Mehwish Aslam
Journal:  Folia Microbiol (Praha)       Date:  2019-07-08       Impact factor: 2.099

5.  Augmenting the genetic toolbox for Sulfolobus islandicus with a stringent positive selectable marker for agmatine prototrophy.

Authors:  Changyi Zhang; Tara E Cooper; David J Krause; Rachel J Whitaker
Journal:  Appl Environ Microbiol       Date:  2013-07-08       Impact factor: 4.792

Review 6.  Acidophilic bacteria and archaea: acid stable biocatalysts and their potential applications.

Authors:  Archana Sharma; Yutaka Kawarabayasi; T Satyanarayana
Journal:  Extremophiles       Date:  2011-11-13       Impact factor: 2.395

7.  Development of a simvastatin selection marker for a hyperthermophilic acidophile, Sulfolobus islandicus.

Authors:  Tao Zheng; Qihong Huang; Changyi Zhang; Jinfeng Ni; Qunxin She; Yulong Shen
Journal:  Appl Environ Microbiol       Date:  2011-11-11       Impact factor: 4.792

8.  Unmarked gene deletion and host-vector system for the hyperthermophilic crenarchaeon Sulfolobus islandicus.

Authors:  Ling Deng; Haojun Zhu; Zhengjun Chen; Yun Xiang Liang; Qunxin She
Journal:  Extremophiles       Date:  2009-06-10       Impact factor: 2.395

Review 9.  Archaeal RNA polymerase.

Authors:  Akira Hirata; Katsuhiko S Murakami
Journal:  Curr Opin Struct Biol       Date:  2009-10-31       Impact factor: 6.809

10.  "Hot standards" for the thermoacidophilic archaeon Sulfolobus solfataricus.

Authors:  Melanie Zaparty; Dominik Esser; Susanne Gertig; Patrick Haferkamp; Theresa Kouril; Andrea Manica; Trong K Pham; Julia Reimann; Kerstin Schreiber; Pawel Sierocinski; Daniela Teichmann; Marleen van Wolferen; Mathias von Jan; Patricia Wieloch; Sonja V Albers; Arnold J M Driessen; Hans-Peter Klenk; Christa Schleper; Dietmar Schomburg; John van der Oost; Phillip C Wright; Bettina Siebers
Journal:  Extremophiles       Date:  2009-10-04       Impact factor: 2.395

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