Literature DB >> 19047639

Kinesin's cover-neck bundle folds forward to generate force.

Ahmad S Khalil1, David C Appleyard, Anna K Labno, Adrien Georges, Martin Karplus, Angela M Belcher, Wonmuk Hwang, Matthew J Lang.   

Abstract

Each step of the kinesin motor involves a force-generating molecular rearrangement. Although significant progress has been made in elucidating the broad features of the kinesin mechanochemical cycle, molecular details of the force generation mechanism remain a mystery. Recent molecular dynamics simulations have suggested a mechanism in which the forward drive is produced when the N-terminal cover strand forms a beta-sheet with the neck linker to yield the cover-neck bundle. We tested this proposal by comparing optical trapping motility measurements of cover strand mutants with the wild-type. Motility data, as well as kinetic analyses, revealed impairment of the force-generating capacity accompanied by a greater load dependence in the mechanochemical cycle. In particular, a mutant with the cover strand deleted functioned only marginally, despite the fact that the cover strand, the N-terminal "dangling end," unlike the neck linker and nucleotide-binding pocket, is not involved with any previously considered energy transduction pathway. Furthermore, a constant assisting load, likely in lieu of a power stroke, was shown to rescue forward motility in the cover strand deletion mutant. Our results support a stepping mechanism driven by dynamic cover-neck bundle formation. They also suggest a strategy to generate motors with altered mechanical characteristics by targeting the force-generating element.

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Year:  2008        PMID: 19047639      PMCID: PMC2592363          DOI: 10.1073/pnas.0805147105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

Review 1.  The way things move: looking under the hood of molecular motor proteins.

Authors:  R D Vale; R A Milligan
Journal:  Science       Date:  2000-04-07       Impact factor: 47.728

2.  A structural change in the kinesin motor protein that drives motility.

Authors:  S Rice; A W Lin; D Safer; C L Hart; N Naber; B O Carragher; S M Cain; E Pechatnikova; E M Wilson-Kubalek; M Whittaker; E Pate; R Cooke; E W Taylor; R A Milligan; R D Vale
Journal:  Nature       Date:  1999-12-16       Impact factor: 49.962

3.  Simple mechanochemistry describes the dynamics of kinesin molecules.

Authors:  M E Fisher; A B Kolomeisky
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-26       Impact factor: 11.205

4.  Switch-based mechanism of kinesin motors.

Authors:  M Kikkawa; E P Sablin; Y Okada; H Yajima; R J Fletterick; N Hirokawa
Journal:  Nature       Date:  2001-05-24       Impact factor: 49.962

5.  Thermodynamic properties of the kinesin neck-region docking to the catalytic core.

Authors:  S Rice; Y Cui; C Sindelar; N Naber; M Matuska; R Vale; R Cooke
Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

Review 6.  The molecular motor toolbox for intracellular transport.

Authors:  Ronald D Vale
Journal:  Cell       Date:  2003-02-21       Impact factor: 41.582

7.  Probing the kinesin reaction cycle with a 2D optical force clamp.

Authors:  Steven M Block; Charles L Asbury; Joshua W Shaevitz; Matthew J Lang
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-18       Impact factor: 11.205

8.  An automated two-dimensional optical force clamp for single molecule studies.

Authors:  Matthew J Lang; Charles L Asbury; Joshua W Shaevitz; Steven M Block
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

9.  Two conformations in the human kinesin power stroke defined by X-ray crystallography and EPR spectroscopy.

Authors:  Charles V Sindelar; Mary Jane Budny; Sarah Rice; Nariman Naber; Robert Fletterick; Roger Cooke
Journal:  Nat Struct Biol       Date:  2002-11

10.  Simulation of Top7-CFr: a transient helix extension guides folding.

Authors:  Sandipan Mohanty; Jan H Meinke; Olav Zimmermann; Ulrich H E Hansmann
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-11       Impact factor: 11.205

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  67 in total

1.  A structural perspective on the dynamics of kinesin motors.

Authors:  Changbong Hyeon; José N Onuchic
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

2.  Modulation of the kinesin ATPase cycle by neck linker docking and microtubule binding.

Authors:  Yu Cheng Zhao; F Jon Kull; Jared C Cochran
Journal:  J Biol Chem       Date:  2010-06-17       Impact factor: 5.157

3.  Kinesins at a glance.

Authors:  Sharyn A Endow; F Jon Kull; Honglei Liu
Journal:  J Cell Sci       Date:  2010-10-15       Impact factor: 5.285

4.  The structure of the kinesin-1 motor-tail complex reveals the mechanism of autoinhibition.

Authors:  Hung Yi Kristal Kaan; David D Hackney; Frank Kozielski
Journal:  Science       Date:  2011-08-12       Impact factor: 47.728

5.  Kinetics of nucleotide-dependent structural transitions in the kinesin-1 hydrolysis cycle.

Authors:  Keith J Mickolajczyk; Nathan C Deffenbaugh; Jaime Ortega Arroyo; Joanna Andrecka; Philipp Kukura; William O Hancock
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-16       Impact factor: 11.205

6.  Biased Brownian motion as a mechanism to facilitate nanometer-scale exploration of the microtubule plus end by a kinesin-8.

Authors:  Yongdae Shin; Yaqing Du; Scott E Collier; Melanie D Ohi; Matthew J Lang; Ryoma Ohi
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-06       Impact factor: 11.205

Review 7.  Mechanism and regulation of kinesin-5, an essential motor for the mitotic spindle.

Authors:  Joshua S Waitzman; Sarah E Rice
Journal:  Biol Cell       Date:  2013-11-26       Impact factor: 4.458

8.  Kar3Vik1 mechanochemistry is inhibited by mutation or deletion of the C terminus of the Vik1 subunit.

Authors:  Monika Joshi; Da Duan; Doran Drew; Zhimeng Jia; Darlene Davis; Robert L Campbell; John S Allingham
Journal:  J Biol Chem       Date:  2013-11-16       Impact factor: 5.157

9.  Kinesin's step dissected with single-motor FRET.

Authors:  Sander Verbrugge; Zdenek Lansky; Erwin J G Peterman
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-01       Impact factor: 11.205

10.  Use of an optical trap for study of host-pathogen interactions for dynamic live cell imaging.

Authors:  Jenny M Tam; Carlos E Castro; Robert J W Heath; Michael K Mansour; Michael L Cardenas; Ramnik J Xavier; Matthew J Lang; Jatin M Vyas
Journal:  J Vis Exp       Date:  2011-07-28       Impact factor: 1.355

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