Literature DB >> 19044889

Relaxation and fluctuations of the number of particles in a membrane channel at arbitrary particle-channel interaction.

Vladimir Yu Zitserman1, Alexander M Berezhkovskii, Mark A Pustovoit, Sergey M Bezrukov.   

Abstract

We analyze the relaxation of the particle number fluctuations in a membrane channel at arbitrary particle-channel interaction and derive general expressions for the relaxation time and low-frequency limit of the power spectral density. These expressions simplify significantly when the channel is symmetric. For a square-well potential of mean force that occupies the entire channel, we verify the accuracy of the analytical predictions by Brownian dynamics simulations. For such a channel we show that as the depth of the well increases, the familiar scaling of the relaxation time with the channel length squared is transformed into a linear dependence on the length.

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Year:  2008        PMID: 19044889      PMCID: PMC2671669          DOI: 10.1063/1.2972981

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


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