Literature DB >> 19020357

A magic triangle for experimental phasing of macromolecules.

Tobias Beck1, Andrius Krasauskas, Tim Gruene, George M Sheldrick.   

Abstract

Obtaining phase information for the solution of macromolecular structures is still one of the bottlenecks in X-ray crystallography. 5-Amino-2,4,6-triiodoisophthalic acid (I3C), in which three covalently bound iodines form an equilateral triangle, was incorporated into proteins in order to obtain phases by single-wavelength anomalous dispersion (SAD). An improved binding capability compared with simple heavy-metal ions, ready availability, improved recognition of potential heavy-atom sites and low toxicity make I3C particularly suitable for experimental phasing.

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Year:  2008        PMID: 19020357     DOI: 10.1107/S0907444908030266

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  28 in total

1.  A multivariate likelihood SIRAS function for phasing and model refinement.

Authors:  Pavol Skubák; Garib Murshudov; Navraj S Pannu
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-09-16

2.  The atypical response regulator protein ChxR has structural characteristics and dimer interface interactions that are unique within the OmpR/PhoB subfamily.

Authors:  John M Hickey; Scott Lovell; Kevin P Battaile; Lei Hu; C Russell Middaugh; P Scott Hefty
Journal:  J Biol Chem       Date:  2011-07-20       Impact factor: 5.157

3.  Membrane protein structure determination by SAD, SIR, or SIRAS phasing in serial femtosecond crystallography using an iododetergent.

Authors:  Takanori Nakane; Shinya Hanashima; Mamoru Suzuki; Haruka Saiki; Taichi Hayashi; Keisuke Kakinouchi; Shigeru Sugiyama; Satoshi Kawatake; Shigeru Matsuoka; Nobuaki Matsumori; Eriko Nango; Jun Kobayashi; Tatsuro Shimamura; Kanako Kimura; Chihiro Mori; Naoki Kunishima; Michihiro Sugahara; Yoko Takakyu; Shigeyuki Inoue; Tetsuya Masuda; Toshiaki Hosaka; Kensuke Tono; Yasumasa Joti; Takashi Kameshima; Takaki Hatsui; Makina Yabashi; Tsuyoshi Inoue; Osamu Nureki; So Iwata; Michio Murata; Eiichi Mizohata
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-31       Impact factor: 11.205

4.  Crystallization and preliminary X-ray crystallographic analysis of recombinant β-mannosidase from Aspergillus niger.

Authors:  Gabriel Demo; Barbora Fliedrová; Lenka Weignerová; Michaela Wimmerová
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-02-23

5.  Assembly of Multi-tRNA Synthetase Complex via Heterotetrameric Glutathione Transferase-homology Domains.

Authors:  Ha Yeon Cho; Seo Jin Maeng; Hyo Je Cho; Yoon Seo Choi; Jeong Min Chung; Sangmin Lee; Hoi Kyoung Kim; Jong Hyun Kim; Chi-Yong Eom; Yeon-Gil Kim; Min Guo; Hyun Suk Jung; Beom Sik Kang; Sunghoon Kim
Journal:  J Biol Chem       Date:  2015-10-15       Impact factor: 5.157

6.  In-house SAD phasing with surface-bound cerium ions.

Authors:  K Natesan Vennila; Devadasan Velmurugan
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-11-25

7.  Crystallization and preliminary X-ray crystallographic analysis of the Bag2 amino-terminal domain from Mus musculus.

Authors:  Richard C Page; Zhen Xu; Joseph Amick; Jay C Nix; Saurav Misra
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-05-23

8.  Crystal structure of the outer membrane protein RcsF, a new substrate for the periplasmic protein-disulfide isomerase DsbC.

Authors:  Pauline Leverrier; Jean-Paul Declercq; Katleen Denoncin; Didier Vertommen; Annie Hiniker; Seung-Hyun Cho; Jean-François Collet
Journal:  J Biol Chem       Date:  2011-03-16       Impact factor: 5.157

9.  Stereochemical determinants of C-terminal specificity in PDZ peptide-binding domains: a novel contribution of the carboxylate-binding loop.

Authors:  Jeanine F Amacher; Patrick R Cushing; Christopher D Bahl; Tobias Beck; Dean R Madden
Journal:  J Biol Chem       Date:  2012-12-15       Impact factor: 5.157

10.  The magic triangle goes MAD: experimental phasing with a bromine derivative.

Authors:  Tobias Beck; Tim Gruene; George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24
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