Literature DB >> 19012294

Orientation of the monomeric porin OmpG in planar lipid bilayers.

Min Chen1, Qiu-Hong Li, Hagan Bayley.   

Abstract

Outer membrane protein G (OmpG) is a non-selective porin from Escherichia coli. OmpG is a monomer, which makes it unusual among porins, and suggests that it may be useful in biotechnology. In planar lipid bilayers, individual OmpG pores reconstituted by insertion from detergent exhibit pronounced asymmetry in current-voltage relationships and voltage-dependent gating. Here, this asymmetry is used to deduce the orientation of OmpG in the bilayers. We introduced two cysteines into the extracellular loops of OmpG. Cleavage of the disulfide bond formed by these residues significantly increases spontaneous gating of the pore. By adding DTT to one side of the bilayer or the other, we demonstrated that pores showing a quiet trace at negative potentials have a "trans" conformation (extracellular loops on the trans side of the bilayer), while pores showing a quiet trace at positive potentials have a "cis" conformation (extracellular loops on the cis side). With this knowledge, we examined the binding of a cyclodextrin to OmpG. When the cyclodextrin was presented to the extracellular face of the pore, transient multisite interactions were observed. In contrast, when the cyclodextrin was presented to the periplasmic face, a more stable single-site interaction occurred. Because the cyclodextrin can act as a molecular adapter by binding analytes, this information serves to advance the use of OmpG as a biosensor.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 19012294      PMCID: PMC3498615          DOI: 10.1002/cbic.200800444

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  36 in total

1.  Stochastic sensing of organic analytes by a pore-forming protein containing a molecular adapter.

Authors:  L Q Gu; O Braha; S Conlan; S Cheley; H Bayley
Journal:  Nature       Date:  1999-04-22       Impact factor: 49.962

2.  Electrophysiological behavior of the TolC channel-tunnel in planar lipid bilayers.

Authors:  C Andersen; C Hughes; V Koronakis
Journal:  J Membr Biol       Date:  2002-02-05       Impact factor: 1.843

3.  Biochemical and biophysical characterization of OmpG: A monomeric porin.

Authors:  S Conlan; Y Zhang; S Cheley; H Bayley
Journal:  Biochemistry       Date:  2000-10-03       Impact factor: 3.162

4.  Porins from plants. Molecular cloning and functional characterization of two new members of the porin family.

Authors:  K Fischer; A Weber; S Brink; B Arbinger; D Schünemann; S Borchert; H W Heldt; B Popp; R Benz; T A Link
Journal:  J Biol Chem       Date:  1994-10-14       Impact factor: 5.157

5.  Structural basis for sugar translocation through maltoporin channels at 3.1 A resolution.

Authors:  T Schirmer; T A Keller; Y F Wang; J P Rosenbusch
Journal:  Science       Date:  1995-01-27       Impact factor: 47.728

6.  Rapid intracellular TEA block of the KcsA potassium channel.

Authors:  Esin Kutluay; Benoît Roux; Lise Heginbotham
Journal:  Biophys J       Date:  2004-11-19       Impact factor: 4.033

7.  Understanding nature's design for a nanosyringe.

Authors:  Carlos F Lopez; Steve O Nielsen; Preston B Moore; Michael L Klein
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-12       Impact factor: 11.205

8.  Stochastic sensing of nanomolar inositol 1,4,5-trisphosphate with an engineered pore.

Authors:  Stephen Cheley; Li Qun Gu; Hagan Bayley
Journal:  Chem Biol       Date:  2002-07

9.  Deletions of single extracellular loops affect pH sensitivity, but not voltage dependence, of the Escherichia coli porin OmpF.

Authors:  Arnaud Baslé; Randa Qutub; Mahsa Mehrazin; Jamie Wibbenmeyer; Anne H Delcour
Journal:  Protein Eng Des Sel       Date:  2004-10-06       Impact factor: 1.650

Review 10.  The patch-clamp and planar lipid bilayer techniques: powerful and versatile tools to investigate the CFTR Cl- channel.

Authors:  David N Sheppard; Michael A Gray; Xiandi Gong; Yoshiro Sohma; Ilana Kogan; Dale J Benos; Toby S Scott-Ward; Jeng-Haur Chen; Hongyu Li; Zhiwei Cai; Jyoti Gupta; Canhui Li; Mohabir Ramjeesingh; Bakhrom K Berdiev; Iskander I Ismailov; Christine E Bear; Tzyh-Chang Hwang; Paul Linsdell; Martin J Hug
Journal:  J Cyst Fibros       Date:  2004-08       Impact factor: 5.482

View more
  11 in total

1.  Mutation of the critical pH-gating residues histidine 231 to glutamate increase open probability of outer membrane protein G in planar lipid bilayer.

Authors:  Mu Yu; Peibei Sun; Yao He; Liang Xiao; Demeng Sun; Longhua Zhang; Changlin Tian
Journal:  Protein Cell       Date:  2013-11       Impact factor: 14.870

2.  A Nanopore Approach for Analysis of Caspase-7 Activity in Cell Lysates.

Authors:  Bach Pham; Scott J Eron; Maureen E Hill; Xin Li; Monifa A Fahie; Jeanne A Hardy; Min Chen
Journal:  Biophys J       Date:  2019-08-02       Impact factor: 4.033

3.  Engineering a Novel Porin OmpGF Via Strand Replacement from Computational Analysis of Sequence Motif.

Authors:  Meishan Lin; Ge Zhang; Monifa Fahie; Leslie K Morgan; Min Chen; Timothy A Keiderling; Linda J Kenney; Jie Liang
Journal:  Biochim Biophys Acta Biomembr       Date:  2017-03-21       Impact factor: 3.747

4.  Single-channel properties, sugar specificity, and role of chitoporin in adaptive survival of Vibrio cholerae type strain O1.

Authors:  Hannadige Sasimali Madusanka Soysa; Anuwat Aunkham; Albert Schulte; Wipa Suginta
Journal:  J Biol Chem       Date:  2020-05-14       Impact factor: 5.157

5.  Aberrantly Large Single-Channel Conductance of Polyhistidine Arm-Containing Protein Nanopores.

Authors:  Avinash Kumar Thakur; Motahareh Ghahari Larimi; Kristin Gooden; Liviu Movileanu
Journal:  Biochemistry       Date:  2017-08-28       Impact factor: 3.162

6.  Molecular bases of cyclodextrin adapter interactions with engineered protein nanopores.

Authors:  Arijit Banerjee; Ellina Mikhailova; Stephen Cheley; Li-Qun Gu; Michelle Montoya; Yasuo Nagaoka; Eric Gouaux; Hagan Bayley
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-16       Impact factor: 11.205

7.  Resolved single-molecule detection of individual species within a mixture of anti-biotin antibodies using an engineered monomeric nanopore.

Authors:  Monifa Fahie; Christina Chisholm; Min Chen
Journal:  ACS Nano       Date:  2015-01-22       Impact factor: 15.881

8.  Tuning the selectivity and sensitivity of an OmpG nanopore sensor by adjusting ligand tether length.

Authors:  Monifa A Fahie; Bib Yang; Bach Pham; Min Chen
Journal:  ACS Sens       Date:  2016-03-30       Impact factor: 7.711

9.  Selective Detection of Protein Homologues in Serum Using an OmpG Nanopore.

Authors:  Monifa A Fahie; Bib Yang; Martin Mullis; Matthew A Holden; Min Chen
Journal:  Anal Chem       Date:  2015-10-23       Impact factor: 6.986

10.  Insertion state of modular protein nanopores into a membrane.

Authors:  Motahareh Ghahari Larimi; Jeung-Hoi Ha; Stewart N Loh; Liviu Movileanu
Journal:  Biochim Biophys Acta Biomembr       Date:  2021-01-30       Impact factor: 3.747

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.