Literature DB >> 26451707

Selective Detection of Protein Homologues in Serum Using an OmpG Nanopore.

Monifa A Fahie1, Bib Yang1, Martin Mullis1, Matthew A Holden1, Min Chen1.   

Abstract

Outer membrane protein G is a monomeric β-barrel porin that has seven flexible loops on its extracellular side. Conformational changes of these labile loops induce gating spikes in current recordings that we exploited as the prime sensing element for protein detection. The gating characteristics, open probability, frequency, and current decrease, provide rich information for analyte identification. Here, we show that two antibiotin antibodies each induced a distinct gating pattern, which allowed them to be readily detected and simultaneously discriminated by a single OmpG nanopore in the presence of fetal bovine serum. Our results demonstrate the feasibility of directly profiling proteins in real-world samples with minimal or no sample pretreatment.

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Year:  2015        PMID: 26451707      PMCID: PMC5065927          DOI: 10.1021/acs.analchem.5b03350

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  41 in total

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Review 10.  The potential and challenges of nanopore sequencing.

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Journal:  Nat Biotechnol       Date:  2008-10       Impact factor: 54.908

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  28 in total

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4.  High-resolution structure prediction of β-barrel membrane proteins.

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6.  Different Anomeric Sugar Bound States of Maltose Binding Protein Resolved by a Cytolysin A Nanopore Tweezer.

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7.  Single-Molecule Protein Detection in a Biofluid Using a Quantitative Nanopore Sensor.

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8.  Mechanism of OmpG pH-Dependent Gating from Loop Ensemble and Single Channel Studies.

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9.  Tuning the selectivity and sensitivity of an OmpG nanopore sensor by adjusting ligand tether length.

Authors:  Monifa A Fahie; Bib Yang; Bach Pham; Min Chen
Journal:  ACS Sens       Date:  2016-03-30       Impact factor: 7.711

10.  A pH-independent quiet OmpG pore with enhanced electrostatic repulsion among the extracellular loops.

Authors:  Bach Pham; Christina M Chisholm; Joshua Foster; Emily Friis; Monifa A Fahie; Min Chen
Journal:  Biochim Biophys Acta Biomembr       Date:  2020-10-13       Impact factor: 3.747

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