Literature DB >> 18991434

Structural flexibility of a helical peptide regulates vibrational energy transport properties.

Ellen H G Backus1, Phuong H Nguyen, Virgiliu Botan, Alessandro Moretto, Marco Crisma, Claudio Toniolo, Oliver Zerbe, Gerhard Stock, Peter Hamm.   

Abstract

Applying ultrafast vibrational spectroscopy, we find that vibrational energy transport along a helical peptide changes from inefficient but mostly ballistic below approximately 270 K into diffusive and significantly more efficient above. On the basis of molecular dynamics simulations, we attribute this change to the increasing flexibility of the helix above this temperature, similar to the glass transition in proteins. Structural flexibility enhances intramolecular vibrational energy redistribution, thereby refeeding energy into the few vibrational modes that delocalize over large parts of the structure and therefore transport energy efficiently. The paper outlines concepts how one might regulate vibrational energy transport properties in ultrafast photobiological processes, as well as in molecular electronic devices, by engineering the flexibility of their components.

Mesh:

Substances:

Year:  2008        PMID: 18991434     DOI: 10.1021/jp806403p

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  7 in total

Review 1.  Locating and Navigating Energy Transport Networks in Proteins.

Authors:  Korey M Reid; David M Leitner
Journal:  Methods Mol Biol       Date:  2021

2.  Anisotropic energy flow and allosteric ligand binding in albumin.

Authors:  Guifeng Li; Donny Magana; R Brian Dyer
Journal:  Nat Commun       Date:  2014       Impact factor: 14.919

3.  Femtosecond IR pump-probe spectroscopy of nonlinear energy localization in protein models and model proteins.

Authors:  Peter Hamm
Journal:  J Biol Phys       Date:  2009-02-21       Impact factor: 1.365

4.  Tuning Molecular Vibrational Energy Flow within an Aromatic Scaffold via Anharmonic Coupling.

Authors:  Andrew J Schmitz; Hari Datt Pandey; Farzaneh Chalyavi; Tianjiao Shi; Edward E Fenlon; Scott H Brewer; David M Leitner; Matthew J Tucker
Journal:  J Phys Chem A       Date:  2019-12-03       Impact factor: 2.781

5.  A spin-1 representation for dual-funnel energy landscapes.

Authors:  Justin E Elenewski; Kirill A Velizhanin; Michael Zwolak
Journal:  J Chem Phys       Date:  2018-07-21       Impact factor: 3.488

Review 6.  Water Dynamics in the Hydration Shells of Biomolecules.

Authors:  Damien Laage; Thomas Elsaesser; James T Hynes
Journal:  Chem Rev       Date:  2017-03-01       Impact factor: 60.622

7.  Topology, landscapes, and biomolecular energy transport.

Authors:  Justin E Elenewski; Kirill A Velizhanin; Michael Zwolak
Journal:  Nat Commun       Date:  2019-10-11       Impact factor: 14.919

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.