Literature DB >> 18989513

Omics meets hypothesis-driven research. Partnership for innovative discoveries in vascular biology and angiogenesis.

Curzio Rüegg1, Jean-Daniel Tissot, Pierre Farmer, Agnese Mariotti.   

Abstract

The emergence of omics technologies allowing the global analysis of a given biological or molecular system, rather than the study of its individual components, has revolutionized biomedical research, including cardiovascular medicine research in the past decade. These developments raised the prospect that classical, hypothesis-driven, single gene-based approaches may soon become obsolete. The experience accumulated so far, however, indicates that omic technologies only represent tools similar to those classically used by scientists in the past and nowadays, to make hypothesis and build models, with the main difference that they generate large amounts of unbiased information. Thus, omics and classical hypothesis-driven research are rather complementary approaches with the potential to effectively synergize to boost research in many fields, including cardiovascular medicine. In this article we discuss some general aspects of omics approaches, and review contributions in three areas of vascular biology, thrombosis and haemostasis, atherosclerosis and angiogenesis, in which omics approaches have already been applied (vasculomics).

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Mesh:

Year:  2008        PMID: 18989513

Source DB:  PubMed          Journal:  Thromb Haemost        ISSN: 0340-6245            Impact factor:   5.249


  7 in total

Review 1.  Systems biology and heart failure: concepts, methods, and potential research applications.

Authors:  Kirkwood F Adams
Journal:  Heart Fail Rev       Date:  2010-07       Impact factor: 4.214

Review 2.  Harnessing systems biology approaches to engineer functional microvascular networks.

Authors:  Lauren S Sefcik; Jennifer L Wilson; Jason A Papin; Edward A Botchwey
Journal:  Tissue Eng Part B Rev       Date:  2010-06       Impact factor: 6.389

3.  Systems biology identifies cytosolic PLA2 as a target in vascular calcification treatment.

Authors:  Joost P Schanstra; Trang Td Luong; Manousos Makridakis; Sophie Van Linthout; Vasiliki Lygirou; Agnieszka Latosinska; Ioana Alesutan; Beate Boehme; Nadeshda Schelski; Dirk Von Lewinski; William Mullen; Stuart Nicklin; Christian Delles; Guylène Feuillet; Colette Denis; Florian Lang; Burkert Pieske; Jean-Loup Bascands; Harald Mischak; Jean-Sebastien Saulnier-Blache; Jakob Voelkl; Antonia Vlahou; Julie Klein
Journal:  JCI Insight       Date:  2019-05-16

Review 4.  Recent Advances in the Etiopathogenesis of Inflammatory Bowel Disease: The Role of Omics.

Authors:  Eleni Stylianou
Journal:  Mol Diagn Ther       Date:  2018-02       Impact factor: 4.074

5.  Platelet procoagulant phenotype is modulated by a p38-MK2 axis that regulates RTN4/Nogo proximal to the endoplasmic reticulum: utility of pathway analysis.

Authors:  Özgün Babur; Anh T P Ngo; Rachel A Rigg; Jiaqing Pang; Zhoe T Rub; Ariana E Buchanan; Annachiara Mitrugno; Larry L David; Owen J T McCarty; Emek Demir; Joseph E Aslan
Journal:  Am J Physiol Cell Physiol       Date:  2018-02-07       Impact factor: 4.249

6.  Semantically enabled and statistically supported biological hypothesis testing with tissue microarray databases.

Authors:  Young Soo Song; Chan Hee Park; Hee-Joon Chung; Hyunjung Shin; Jihun Kim; Ju Han Kim
Journal:  BMC Bioinformatics       Date:  2011-02-15       Impact factor: 3.169

7.  Connectivity mapping of glomerular proteins identifies dimethylaminoparthenolide as a new inhibitor of diabetic kidney disease.

Authors:  Julie Klein; Cécile Caubet; Mylène Camus; Manousos Makridakis; Colette Denis; Marion Gilet; Guylène Feuillet; Simon Rascalou; Eric Neau; Luc Garrigues; Olivier Thillaye du Boullay; Harald Mischak; Bernard Monsarrat; Odile Burlet-Schiltz; Antonia Vlahou; Jean Sébastien Saulnier-Blache; Jean-Loup Bascands; Joost P Schanstra
Journal:  Sci Rep       Date:  2020-09-10       Impact factor: 4.379

  7 in total

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