Literature DB >> 18986170

Resonance Raman interrogation of the consequences of heme rotational disorder in myoglobin and its ligated derivatives.

Freeborn Rwere1, Piotr J Mak, James R Kincaid.   

Abstract

Resonance Raman spectroscopy is employed to characterize heme site structural changes arising from conformational heterogeneity in deoxyMb and ligated derivatives, i.e., the ferrous CO (MbCO) and ferric cyanide (MbCN) complexes. The spectra for the reversed forms of these derivatives have been extracted from the spectra of reconstituted samples. Dramatic changes in the low-frequency spectra are observed, where newly observed RR modes of the reversed forms are assigned using protohemes that are selectively deuterated at the four methyl groups or at the four methine carbons. Interestingly, while substantial changes in the disposition of the peripheral vinyl and propionate groups can be inferred from the dramatic spectral shifts, the bonds to the internal histidyl imidazole ligand and those of the Fe-CO and Fe-CN fragments are not significantly affected by the heme rotation, as judged by lack of significant shifts in the nu(Fe-N(His)), nu(Fe-C), and nu(C-O) modes. In fact, the apparent lack of an effect on these key vibrational parameters of the Fe-N(His), Fe-CO, and Fe-CN fragments is entirely consistent with previously reported equilibrium and kinetic studies that document virtually identical functional properties for the native and reversed forms.

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Year:  2008        PMID: 18986170      PMCID: PMC2654223          DOI: 10.1021/bi801779d

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  30 in total

1.  Effect of heme orientation on the reduction potential of cytochrome b5.

Authors:  F A Walker; D Emrick; J E Rivera; B J Hanquet; D H Buttlaire
Journal:  J Am Chem Soc       Date:  1988-08-01       Impact factor: 15.419

2.  Heme distortions in sperm-whale carbonmonoxy myoglobin: correlations between rotational strengths and heme distortions in MD-generated structures.

Authors:  Christoph Kiefl; Narasimha Sreerama; Raid Haddad; Lisong Sun; Walter Jentzen; Yi Lu; Yan Qiu; John A Shelnutt; Robert W Woody
Journal:  J Am Chem Soc       Date:  2002-04-03       Impact factor: 15.419

3.  Functional consequences of haem orientational disorder in sperm-whale and yellow-fin-tuna myoglobins.

Authors:  H S Aojula; M T Wilson; I G Morrison
Journal:  Biochem J       Date:  1987-04-01       Impact factor: 3.857

4.  Haem disorder in two myoglobins: comparison of reorientation rate.

Authors:  A Bellelli; R Foon; F Ascoli; M Brunori
Journal:  Biochem J       Date:  1987-09-15       Impact factor: 3.857

5.  4-vinyl and 2,4-divinyl deuteration effects on the low frequency resonance Raman bands of myoglobin: correlation with the structure of vinyl group.

Authors:  K Uchida; Y Susai; E Hirotani; T Kimura; T Yoneya; H Takeuchi; I Harada
Journal:  J Biochem       Date:  1988-06       Impact factor: 3.387

6.  The impact of altered protein-heme interactions on the resonance Raman spectra of heme proteins. Studies of heme rotational disorder.

Authors:  Freeborn Rwere; Piotr J Mak; James R Kincaid
Journal:  Biopolymers       Date:  2008-03       Impact factor: 2.505

7.  1H-NMR investigation of the influence of the heme orientation on functional properties of myoglobin.

Authors:  Y Yamamoto; T Nakashima; E Kawano; R Chûjô
Journal:  Biochim Biophys Acta       Date:  1998-11-10

8.  Effects of systematic peripheral group deuteration on the low-frequency resonance Raman spectra of myoglobin derivatives.

Authors:  Piotr J Mak; Edyta Podstawka; James R Kincaid; Leonard M Proniewicz
Journal:  Biopolymers       Date:  2004-10-15       Impact factor: 2.505

9.  Phe393 mutants of cytochrome P450 BM3 with modified heme redox potentials have altered heme vinyl and propionate conformations.

Authors:  Zhucheng Chen; Tobias W B Ost; Johannes P M Schelvis
Journal:  Biochemistry       Date:  2004-02-24       Impact factor: 3.162

10.  Bohr effect in monomeric insect haemoglobins controlled by O2 off-rate and modulated by haem-rotational disorder.

Authors:  K Gersonde; H Sick; M Overkamp; K M Smith; D W Parish
Journal:  Eur J Biochem       Date:  1986-06-02
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  3 in total

1.  Distinguishing Active Site Characteristics of Chlorite Dismutases with Their Cyanide Complexes.

Authors:  Zachary Geeraerts; Arianna I Celis; Jeffery A Mayfield; Megan Lorenz; Kenton R Rodgers; Jennifer L DuBois; Gudrun S Lukat-Rodgers
Journal:  Biochemistry       Date:  2018-02-16       Impact factor: 3.162

2.  Unusual Peroxide-Dependent, Heme-Transforming Reaction Catalyzed by HemQ.

Authors:  Arianna I Celis; Bennett R Streit; Garrett C Moraski; Ravi Kant; Timothy D Lash; Gudrun S Lukat-Rodgers; Kenton R Rodgers; Jennifer L DuBois
Journal:  Biochemistry       Date:  2015-06-23       Impact factor: 3.162

3.  Initial Steps to Engineer Coproheme Decarboxylase to Obtain Stereospecific Monovinyl, Monopropionyl Deuterohemes.

Authors:  Hanna Michlits; Nina Valente; Georg Mlynek; Stefan Hofbauer
Journal:  Front Bioeng Biotechnol       Date:  2022-01-24
  3 in total

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