Literature DB >> 18952776

A cytosolic pathway for the conversion of hydroxypyruvate to glycerate during photorespiration in Arabidopsis.

Stefan Timm1, Adriano Nunes-Nesi, Tiit Pärnik, Katja Morgenthal, Stefanie Wienkoop, Olav Keerberg, Wolfram Weckwerth, Leszek A Kleczkowski, Alisdair R Fernie, Hermann Bauwe.   

Abstract

Deletion of any of the core enzymes of the photorespiratory cycle, one of the major pathways of plant primary metabolism, results in severe air-sensitivity of the respective mutants. The peroxisomal enzyme hydroxypyruvate reductase (HPR1) represents the only exception to this rule. This indicates the presence of extraperoxisomal reactions of photorespiratory hydroxypyruvate metabolism. We have identified a second hydroxypyruvate reductase, HPR2, and present genetic and biochemical evidence that the enzyme provides a cytosolic bypass to the photorespiratory core cycle in Arabidopsis thaliana. Deletion of HPR2 results in elevated levels of hydroxypyruvate and other metabolites in leaves. Photosynthetic gas exchange is slightly altered, especially under long-day conditions. Otherwise, the mutant closely resembles wild-type plants. The combined deletion of both HPR1 and HPR2, however, results in distinct air-sensitivity and a dramatic reduction in photosynthetic performance. These results suggest that photorespiratory metabolism is not confined to chloroplasts, peroxisomes, and mitochondria but also extends to the cytosol. The extent to which cytosolic reactions contribute to the operation of the photorespiratory cycle in varying natural environments is not yet known, but it might be dynamically regulated by the availability of NADH in the context of peroxisomal redox homeostasis.

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Year:  2008        PMID: 18952776      PMCID: PMC2590732          DOI: 10.1105/tpc.108.062265

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  42 in total

Review 1.  An early Arabidopsis demonstration. Resolving a few issues concerning photorespiration.

Authors:  C R Somerville
Journal:  Plant Physiol       Date:  2001-01       Impact factor: 8.340

2.  Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems.

Authors:  U Roessner; A Luedemann; D Brust; O Fiehn; T Linke; L Willmitzer; A Fernie
Journal:  Plant Cell       Date:  2001-01       Impact factor: 11.277

3.  Growth stage-based phenotypic analysis of Arabidopsis: a model for high throughput functional genomics in plants.

Authors:  D C Boyes; A M Zayed; R Ascenzi; A J McCaskill; N E Hoffman; K R Davis; J Görlach
Journal:  Plant Cell       Date:  2001-07       Impact factor: 11.277

4.  Oxalate as a potent and selective inhibitor of spinach (Spinacia oleracea) leaf NADPH-dependent hydroxypyruvate reductase.

Authors:  L A Kleczkowski; D D Randall; G E Edwards
Journal:  Biochem J       Date:  1991-05-15       Impact factor: 3.857

Review 5.  Natural genetic variation in Arabidopsis: tools, traits and prospects for evolutionary ecology.

Authors:  Chikako Shindo; Giorgina Bernasconi; Christian S Hardtke
Journal:  Ann Bot       Date:  2007-01-26       Impact factor: 4.357

6.  The enigmatic contribution of mitochondrial function in photosynthesis.

Authors:  Adriano Nunes-Nesi; Ronan Sulpice; Yves Gibon; Alisdair R Fernie
Journal:  J Exp Bot       Date:  2008-02-05       Impact factor: 6.992

7.  Peroxisomal alanine : glyoxylate aminotransferase (AGT1) is a photorespiratory enzyme with multiple substrates in Arabidopsis thaliana.

Authors:  A H Liepman; L J Olsen
Journal:  Plant J       Date:  2001-03       Impact factor: 6.417

8.  D-GLYCERATE 3-KINASE, the last unknown enzyme in the photorespiratory cycle in Arabidopsis, belongs to a novel kinase family.

Authors:  Ralf Boldt; Christoph Edner; Uner Kolukisaoglu; Martin Hagemann; Wolfram Weckwerth; Stefanie Wienkoop; Katja Morgenthal; Hermann Bauwe
Journal:  Plant Cell       Date:  2005-06-24       Impact factor: 11.277

9.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

10.  Mitochondrial uncoupling protein is required for efficient photosynthesis.

Authors:  Lee J Sweetlove; Anna Lytovchenko; Megan Morgan; Adriano Nunes-Nesi; Nicolas L Taylor; Charles J Baxter; Ira Eickmeier; Alisdair R Fernie
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-05       Impact factor: 11.205

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  64 in total

1.  Isotopically nonstationary 13C flux analysis of changes in Arabidopsis thaliana leaf metabolism due to high light acclimation.

Authors:  Fangfang Ma; Lara J Jazmin; Jamey D Young; Doug K Allen
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-03       Impact factor: 11.205

2.  Peroxisome biogenesis and function.

Authors:  Navneet Kaur; Sigrun Reumann; Jianping Hu
Journal:  Arabidopsis Book       Date:  2009-09-11

3.  Photorespiration.

Authors:  Christoph Peterhansel; Ina Horst; Markus Niessen; Christian Blume; Rashad Kebeish; Sophia Kürkcüoglu; Fritz Kreuzaler
Journal:  Arabidopsis Book       Date:  2010-03-23

4.  On the discordance of metabolomics with proteomics and transcriptomics: coping with increasing complexity in logic, chemistry, and network interactions scientific correspondence.

Authors:  Alisdair R Fernie; Mark Stitt
Journal:  Plant Physiol       Date:  2012-01-17       Impact factor: 8.340

Review 5.  Photorespiration redesigned.

Authors:  Christoph Peterhansel; Veronica G Maurino
Journal:  Plant Physiol       Date:  2010-10-12       Impact factor: 8.340

6.  Identification of the 2-hydroxyglutarate and isovaleryl-CoA dehydrogenases as alternative electron donors linking lysine catabolism to the electron transport chain of Arabidopsis mitochondria.

Authors:  Wagner L Araújo; Kimitsune Ishizaki; Adriano Nunes-Nesi; Tony R Larson; Takayuki Tohge; Ina Krahnert; Sandra Witt; Toshihiro Obata; Nicolas Schauer; Ian A Graham; Christopher J Leaver; Alisdair R Fernie
Journal:  Plant Cell       Date:  2010-05-25       Impact factor: 11.277

7.  Thioredoxin, a master regulator of the tricarboxylic acid cycle in plant mitochondria.

Authors:  Danilo M Daloso; Karolin Müller; Toshihiro Obata; Alexandra Florian; Takayuki Tohge; Alexandra Bottcher; Christophe Riondet; Laetitia Bariat; Fernando Carrari; Adriano Nunes-Nesi; Bob B Buchanan; Jean-Philippe Reichheld; Wagner L Araújo; Alisdair R Fernie
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-02       Impact factor: 11.205

8.  PLGG1, a plastidic glycolate glycerate transporter, is required for photorespiration and defines a unique class of metabolite transporters.

Authors:  Thea R Pick; Andrea Bräutigam; Matthias A Schulz; Toshihiro Obata; Alisdair R Fernie; Andreas P M Weber
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-04       Impact factor: 11.205

9.  2-Hydroxy Acids in Plant Metabolism.

Authors:  Veronica G Maurino; Martin K M Engqvist
Journal:  Arabidopsis Book       Date:  2015-09-04

10.  Alteration of the interconversion of pyruvate and malate in the plastid or cytosol of ripening tomato fruit invokes diverse consequences on sugar but similar effects on cellular organic acid, metabolism, and transitory starch accumulation.

Authors:  Sonia Osorio; José G Vallarino; Marek Szecowka; Shai Ufaz; Vered Tzin; Ruthie Angelovici; Gad Galili; Alisdair R Fernie
Journal:  Plant Physiol       Date:  2012-12-18       Impact factor: 8.340

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