Literature DB >> 15980259

D-GLYCERATE 3-KINASE, the last unknown enzyme in the photorespiratory cycle in Arabidopsis, belongs to a novel kinase family.

Ralf Boldt1, Christoph Edner, Uner Kolukisaoglu, Martin Hagemann, Wolfram Weckwerth, Stefanie Wienkoop, Katja Morgenthal, Hermann Bauwe.   

Abstract

D-GLYCERATE 3-KINASE (GLYK; EC 2.7.1.31) catalyzes the concluding reaction of the photorespiratory C2 cycle, an indispensable ancillary metabolic pathway to the photosynthetic C3 cycle that enables land plants to grow in an oxygen-containing atmosphere. Except for GLYK, all other enzymes that contribute to the C2 cycle are known by their primary structures, and the encoding genes have been identified. We have purified and partially sequenced this yet missing enzyme from Arabidopsis thaliana and identified it as a putative kinase-annotated single-copy gene At1g80380. The exclusive catalytic properties of the gene product were confirmed after heterologous expression in Escherichia coli. Arabidopsis T-DNA insertional knockout mutants show no GLYK activity and are not viable in normal air; however, they grow under elevated CO2, providing direct evidence of the obligatory nature of the ultimate step of the C2 cycle. The newly identified GLYK is both structurally and phylogenetically distinct from known glycerate kinases from bacteria and animals. Orthologous enzymes are present in other plants, fungi, and some cyanobacteria. The metabolic context of GLYK activity in fungi and cyanobacteria remains to be investigated.

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Year:  2005        PMID: 15980259      PMCID: PMC1182498          DOI: 10.1105/tpc.105.033993

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  32 in total

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Journal:  Plant Physiol       Date:  2001-01       Impact factor: 8.340

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Journal:  Nat New Biol       Date:  1971-03-31

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Journal:  Comput Appl Biosci       Date:  1994-09

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Authors:  O Emanuelsson; H Nielsen; S Brunak; G von Heijne
Journal:  J Mol Biol       Date:  2000-07-21       Impact factor: 5.469

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Journal:  J Bacteriol       Date:  1999-12       Impact factor: 3.490

10.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

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  46 in total

1.  Photorespiration.

Authors:  Christoph Peterhansel; Ina Horst; Markus Niessen; Christian Blume; Rashad Kebeish; Sophia Kürkcüoglu; Fritz Kreuzaler
Journal:  Arabidopsis Book       Date:  2010-03-23

Review 2.  Photorespiration redesigned.

Authors:  Christoph Peterhansel; Veronica G Maurino
Journal:  Plant Physiol       Date:  2010-10-12       Impact factor: 8.340

3.  Influence of the sigmaB stress factor and yxaB, the gene for a putative exopolysaccharide synthase under sigmaB Control, on biofilm formation.

Authors:  Krzysztofa Nagórska; Krzysztof Hinc; Mark A Strauch; Michał Obuchowski
Journal:  J Bacteriol       Date:  2008-03-07       Impact factor: 3.490

4.  A unique highly thermostable 2-phosphoglycerate forming glycerate kinase from the hyperthermophilic archaeon Pyrococcus horikoshii: gene cloning, expression and characterization.

Authors:  Bo Liu; Ye Hong; Lei Wu; Zhuo Li; Jinfeng Ni; Duohong Sheng; Yulong Shen
Journal:  Extremophiles       Date:  2007-06-12       Impact factor: 2.395

5.  The plant-like C2 glycolate cycle and the bacterial-like glycerate pathway cooperate in phosphoglycolate metabolism in cyanobacteria.

Authors:  Marion Eisenhut; Shira Kahlon; Dirk Hasse; Ralph Ewald; Judy Lieman-Hurwitz; Teruo Ogawa; Wolfgang Ruth; Hermann Bauwe; Aaron Kaplan; Martin Hagemann
Journal:  Plant Physiol       Date:  2006-07-28       Impact factor: 8.340

6.  Evolution of enzymes involved in the photorespiratory 2-phosphoglycolate cycle from cyanobacteria via algae toward plants.

Authors:  Ramona Kern; Hermann Bauwe; Martin Hagemann
Journal:  Photosynth Res       Date:  2011-01-11       Impact factor: 3.573

7.  PLGG1, a plastidic glycolate glycerate transporter, is required for photorespiration and defines a unique class of metabolite transporters.

Authors:  Thea R Pick; Andrea Bräutigam; Matthias A Schulz; Toshihiro Obata; Alisdair R Fernie; Andreas P M Weber
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-04       Impact factor: 11.205

8.  A cytosolic pathway for the conversion of hydroxypyruvate to glycerate during photorespiration in Arabidopsis.

Authors:  Stefan Timm; Adriano Nunes-Nesi; Tiit Pärnik; Katja Morgenthal; Stefanie Wienkoop; Olav Keerberg; Wolfram Weckwerth; Leszek A Kleczkowski; Alisdair R Fernie; Hermann Bauwe
Journal:  Plant Cell       Date:  2008-10-24       Impact factor: 11.277

9.  The photorespiratory glycolate metabolism is essential for cyanobacteria and might have been conveyed endosymbiontically to plants.

Authors:  Marion Eisenhut; Wolfgang Ruth; Maya Haimovich; Hermann Bauwe; Aaron Kaplan; Martin Hagemann
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-28       Impact factor: 11.205

10.  Glycerate 2-kinase of Thermotoga maritima and genomic reconstruction of related metabolic pathways.

Authors:  Chen Yang; Dmitry A Rodionov; Irina A Rodionova; Xiaoqing Li; Andrei L Osterman
Journal:  J Bacteriol       Date:  2007-12-21       Impact factor: 3.490

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