Literature DB >> 18946803

The role of theoretical modeling in microcirculation research.

Timothy W Secomb1, Daniel A Beard, Jefferson C Frisbee, Nicolas P Smith, Axel R Pries.   

Abstract

Theoretical modeling approaches have made important contributions to research in the biological sciences, including the microcirculation, and their value is increasingly recognized. However, misconceptions about the nature and role of theoretical models persist, and such work is often presented in a way that does not maximize its value, especially for scientists who are not themselves using such models. In this review, a categorization of models as phenomenological, qualitative conceptual, quantitative conceptual, or predictive is proposed, and the characteristics of each type are discussed. Recommendations are made for the presentation of models and for the future development of modeling approaches. The concepts discussed are generally applicable to the theoretical modeling of biological systems and are illustrated by using examples of modeling in microcirculation research.

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Year:  2008        PMID: 18946803      PMCID: PMC3135574          DOI: 10.1080/10739680802349734

Source DB:  PubMed          Journal:  Microcirculation        ISSN: 1073-9688            Impact factor:   2.628


  21 in total

Review 1.  Blood viscosity in tube flow: dependence on diameter and hematocrit.

Authors:  A R Pries; D Neuhaus; P Gaehtgens
Journal:  Am J Physiol       Date:  1992-12

2.  Green's function methods for analysis of oxygen delivery to tissue by microvascular networks.

Authors:  Timothy W Secomb; Richard Hsu; Eric Y H Park; Mark W Dewhirst
Journal:  Ann Biomed Eng       Date:  2004-11       Impact factor: 3.934

Review 3.  A strategy for integrative computational physiology.

Authors:  Peter Hunter; Poul Nielsen
Journal:  Physiology (Bethesda)       Date:  2005-10

4.  The number and distribution of capillaries in muscles with calculations of the oxygen pressure head necessary for supplying the tissue.

Authors:  A Krogh
Journal:  J Physiol       Date:  1919-05-20       Impact factor: 5.182

5.  Toward a curated CellML model repository.

Authors:  David Nickerson; Carey Stevens; Matt Halstead; Peter Hunter; Poul Nielsen
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2006

6.  Structural adaptation and stability of microvascular networks: theory and simulations.

Authors:  A R Pries; T W Secomb; P Gaehtgens
Journal:  Am J Physiol       Date:  1998-08

Review 7.  Theoretical models for regulation of blood flow.

Authors:  Timothy W Secomb
Journal:  Microcirculation       Date:  2008-11       Impact factor: 2.628

Review 8.  Systems biology of vascular endothelial growth factors.

Authors:  Feilim Mac Gabhann; Aleksander S Popel
Journal:  Microcirculation       Date:  2008-11       Impact factor: 2.628

Review 9.  Theoretical models of microvascular oxygen transport to tissue.

Authors:  Daniel Goldman
Journal:  Microcirculation       Date:  2008-11       Impact factor: 2.628

Review 10.  Nitric oxide bioavailability in the microcirculation: insights from mathematical models.

Authors:  Nikolaos M Tsoukias
Journal:  Microcirculation       Date:  2008-11       Impact factor: 2.628

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  12 in total

1.  Cerebral blood flow modeling in primate cortex.

Authors:  Romain Guibert; Caroline Fonta; Franck Plouraboué
Journal:  J Cereb Blood Flow Metab       Date:  2010-07-21       Impact factor: 6.200

Review 2.  The microcirculation: physiology at the mesoscale.

Authors:  Timothy W Secomb; Axel R Pries
Journal:  J Physiol       Date:  2011-01-17       Impact factor: 5.182

Review 3.  Making microvascular networks work: angiogenesis, remodeling, and pruning.

Authors:  Axel R Pries; Timothy W Secomb
Journal:  Physiology (Bethesda)       Date:  2014-11

4.  Model-based inference from microvascular measurements: Combining experimental measurements and model predictions using a Bayesian probabilistic approach.

Authors:  Peter M Rasmussen; Amy F Smith; Sava Sakadžić; David A Boas; Axel R Pries; Timothy W Secomb; Leif Østergaard
Journal:  Microcirculation       Date:  2017-05       Impact factor: 2.628

Review 5.  Oxygen transport in the microcirculation and its regulation.

Authors:  Roland N Pittman
Journal:  Microcirculation       Date:  2013-02       Impact factor: 2.628

Review 6.  Modeling of angioadaptation: insights for vascular development.

Authors:  Axel R Pries; Bettina Reglin; Timothy W Secomb
Journal:  Int J Dev Biol       Date:  2011       Impact factor: 2.203

Review 7.  Microcirculation and the physiome projects.

Authors:  James B Bassingthwaighte
Journal:  Microcirculation       Date:  2008-11       Impact factor: 2.628

8.  Modeling the hematocrit distribution in microcirculatory networks: A quantitative evaluation of a phase separation model.

Authors:  Peter M Rasmussen; Timothy W Secomb; Axel R Pries
Journal:  Microcirculation       Date:  2018-04       Impact factor: 2.628

9.  Study of tumor growth under hyperthermia condition.

Authors:  Qing Zhu; Aili Zhang; Ping Liu; Lisa X Xu
Journal:  Comput Math Methods Med       Date:  2012-09-03       Impact factor: 2.238

10.  Capillary recruitment in a theoretical model for blood flow regulation in heterogeneous microvessel networks.

Authors:  Brendan C Fry; Tuhin K Roy; Timothy W Secomb
Journal:  Physiol Rep       Date:  2013-08
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