Literature DB >> 18940605

Virus capsid expansion driven by the capture of mobile surface loops.

Kelly K Lee1, Lu Gan, Hiro Tsuruta, Crystal Moyer, James F Conway, Robert L Duda, Roger W Hendrix, Alasdair C Steven, John E Johnson.   

Abstract

The capsids of tailed-DNA bacteriophages first assemble as procapsids, which mature by converting into a new form that is strong enough to contain a densely packed viral chromosome. We demonstrate that the intersubunit crosslinking that occurs during maturation of HK97 capsids actually promotes the structural transformation. Small-angle X-ray scattering and crosslinking assays reveal that a shift in the crosslink pattern accompanies conversion of a semimature particle, Expansion Intermediate-I/II, to a more mature state, Balloon. This transition occurs in a switch-like fashion. We find that crosslink formation shifts the global conformational balance to favor the balloon state. A pseudoatomic model of EI-I/II derived from cryo-EM provides insight into the relationship between crosslink formation and conformational switching.

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Year:  2008        PMID: 18940605      PMCID: PMC2586091          DOI: 10.1016/j.str.2008.06.014

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  41 in total

1.  Maturation of papillomavirus capsids.

Authors:  Christopher B Buck; Cynthia D Thompson; Yuk-Ying S Pang; Douglas R Lowy; John T Schiller
Journal:  J Virol       Date:  2005-03       Impact factor: 5.103

Review 2.  Virus maturation: dynamics and mechanism of a stabilizing structural transition that leads to infectivity.

Authors:  Alasdair C Steven; J Bernard Heymann; Naiqian Cheng; Benes L Trus; James F Conway
Journal:  Curr Opin Struct Biol       Date:  2005-04       Impact factor: 6.809

3.  Conservation of the capsid structure in tailed dsDNA bacteriophages: the pseudoatomic structure of phi29.

Authors:  Marc C Morais; Kyung H Choi; Jaya S Koti; Paul R Chipman; Dwight L Anderson; Michael G Rossmann
Journal:  Mol Cell       Date:  2005-04-15       Impact factor: 17.970

4.  Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry.

Authors:  Andrei Fokine; Petr G Leiman; Mikhail M Shneider; Bijan Ahvazi; Karen M Boeshans; Alasdair C Steven; Lindsay W Black; Vadim V Mesyanzhinov; Michael G Rossmann
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-06       Impact factor: 11.205

5.  Bacteriophage HK97: assembly of the capsid and evolutionary connections.

Authors:  Roger W Hendrix
Journal:  Adv Virus Res       Date:  2005       Impact factor: 9.937

6.  Cooperative reorganization of a 420 subunit virus capsid.

Authors:  Kelly K Lee; Hiro Tsuruta; Roger W Hendrix; Robert L Duda; John E Johnson
Journal:  J Mol Biol       Date:  2005-09-23       Impact factor: 5.469

7.  Sequence requirements for stabilization of a peptide reverse turn in water solution--proline is not essential for stability.

Authors:  H J Dyson; L Bolinger; V A Feher; J J Osterhout; J Yao; P E Wright
Journal:  Eur J Biochem       Date:  1998-07-15

8.  Protein chainmail: catenated protein in viral capsids.

Authors:  R L Duda
Journal:  Cell       Date:  1998-07-10       Impact factor: 41.582

9.  Crosslinking renders bacteriophage HK97 capsid maturation irreversible and effects an essential stabilization.

Authors:  Philip D Ross; Naiqian Cheng; James F Conway; Brian A Firek; Roger W Hendrix; Robert L Duda; Alasdair C Steven
Journal:  EMBO J       Date:  2005-03-17       Impact factor: 11.598

Review 10.  Structural biology of HIV.

Authors:  B G Turner; M F Summers
Journal:  J Mol Biol       Date:  1999-01-08       Impact factor: 5.469

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  17 in total

1.  The Prohead-I structure of bacteriophage HK97: implications for scaffold-mediated control of particle assembly and maturation.

Authors:  Rick K Huang; Reza Khayat; Kelly K Lee; Ilya Gertsman; Robert L Duda; Roger W Hendrix; John E Johnson
Journal:  J Mol Biol       Date:  2011-01-27       Impact factor: 5.469

Review 2.  Virus maturation.

Authors:  David Veesler; John E Johnson
Journal:  Annu Rev Biophys       Date:  2012-02-23       Impact factor: 12.981

3.  Mechanics of bacteriophage maturation.

Authors:  Wouter H Roos; Ilya Gertsman; Eric R May; Charles L Brooks; John E Johnson; Gijs J L Wuite
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

4.  Flexible Connectors between Capsomer Subunits that Regulate Capsid Assembly.

Authors:  Mary L Hasek; Joshua B Maurer; Roger W Hendrix; Robert L Duda
Journal:  J Mol Biol       Date:  2017-07-10       Impact factor: 5.469

5.  Maturation in action: CryoEM study of a viral capsid caught during expansion.

Authors:  David Veesler; Joel Quispe; Nikolaus Grigorieff; Clinton S Potter; Bridget Carragher; John E Johnson
Journal:  Structure       Date:  2012-06-28       Impact factor: 5.006

Review 6.  Roger Hendrix: Gentle Provocateur.

Authors:  Sherwood R Casjens; Graham F Hatfull
Journal:  J Bacteriol       Date:  2018-04-09       Impact factor: 3.490

Review 7.  Virus particle maturation: insights into elegantly programmed nanomachines.

Authors:  John E Johnson
Journal:  Curr Opin Struct Biol       Date:  2010-02-09       Impact factor: 6.809

8.  Architecture of a dsDNA viral capsid in complex with its maturation protease.

Authors:  David Veesler; Reza Khayat; Srinath Krishnamurthy; Joost Snijder; Rick K Huang; Albert J R Heck; Ganesh S Anand; John E Johnson
Journal:  Structure       Date:  2013-12-19       Impact factor: 5.006

9.  Functional domains of the HK97 capsid maturation protease and the mechanisms of protein encapsidation.

Authors:  Robert L Duda; Bonnie Oh; Roger W Hendrix
Journal:  J Mol Biol       Date:  2013-05-17       Impact factor: 5.469

10.  HK97 maturation studied by crystallography and H/2H exchange reveals the structural basis for exothermic particle transitions.

Authors:  Ilya Gertsman; Elizabeth A Komives; John E Johnson
Journal:  J Mol Biol       Date:  2010-01-20       Impact factor: 5.469

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