Literature DB >> 18852696

Biological principles of microRNA-mediated regulation: shared themes amid diversity.

Alex S Flynt1, Eric C Lai.   

Abstract

Regulation of gene activity by microRNAs is critical to myriad aspects of eukaryotic development and physiology. Amidst an extensive regulatory web that is predicted to involve thousands of transcripts, emergent themes are now beginning to illustrate how microRNAs have been incorporated into diverse settings. These include potent inhibition of individual key targets, fine-tuning of target activity, the coordinated regulation of target batteries, and the reversibility of some aspects of microRNA-mediated repression. Such themes may reflect some of the inherent advantages of exploiting microRNA control in biological circuits, and provide insight into the consequences of microRNA dysfunction in disease.

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Year:  2008        PMID: 18852696      PMCID: PMC2729318          DOI: 10.1038/nrg2455

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  110 in total

Review 1.  The growing catalog of small RNAs and their association with distinct Argonaute/Piwi family members.

Authors:  Thalia A Farazi; Stefan A Juranek; Thomas Tuschl
Journal:  Development       Date:  2008-02-20       Impact factor: 6.868

2.  Dicer ablation affects antibody diversity and cell survival in the B lymphocyte lineage.

Authors:  Sergei B Koralov; Stefan A Muljo; Gunther R Galler; Azra Krek; Tirtha Chakraborty; Chryssa Kanellopoulou; Kari Jensen; Bradley S Cobb; Matthias Merkenschlager; Nikolaus Rajewsky; Klaus Rajewsky
Journal:  Cell       Date:  2008-03-07       Impact factor: 41.582

Review 3.  Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?

Authors:  Witold Filipowicz; Suvendra N Bhattacharyya; Nahum Sonenberg
Journal:  Nat Rev Genet       Date:  2008-02       Impact factor: 53.242

Review 4.  Small non-coding RNAs in animal development.

Authors:  Giovanni Stefani; Frank J Slack
Journal:  Nat Rev Mol Cell Biol       Date:  2008-03       Impact factor: 94.444

5.  Gene regulation by transcription factors and microRNAs.

Authors:  Oliver Hobert
Journal:  Science       Date:  2008-03-28       Impact factor: 47.728

6.  Regulation of progenitor cell proliferation and granulocyte function by microRNA-223.

Authors:  Jonathan B Johnnidis; Marian H Harris; Robert T Wheeler; Sandra Stehling-Sun; Michael H Lam; Oktay Kirak; Thijn R Brummelkamp; Mark D Fleming; Fernando D Camargo
Journal:  Nature       Date:  2008-02-17       Impact factor: 49.962

7.  Regulation of the Drosophila lin-41 homologue dappled by let-7 reveals conservation of a regulatory mechanism within the LIN-41 subclade.

Authors:  Fergal O'Farrell; Shiva Seyedoleslami Esfahani; Ylva Engström; Per Kylsten
Journal:  Dev Dyn       Date:  2008-01       Impact factor: 3.780

8.  Widespread microRNA repression by Myc contributes to tumorigenesis.

Authors:  Tsung-Cheng Chang; Duonan Yu; Yun-Sil Lee; Erik A Wentzel; Dan E Arking; Kristin M West; Chi V Dang; Andrei Thomas-Tikhonenko; Joshua T Mendell
Journal:  Nat Genet       Date:  2007-12-09       Impact factor: 38.330

9.  Targeted deletion reveals essential and overlapping functions of the miR-17 through 92 family of miRNA clusters.

Authors:  Andrea Ventura; Amanda G Young; Monte M Winslow; Laura Lintault; Alex Meissner; Stefan J Erkeland; Jamie Newman; Roderick T Bronson; Denise Crowley; James R Stone; Rudolf Jaenisch; Phillip A Sharp; Tyler Jacks
Journal:  Cell       Date:  2008-03-07       Impact factor: 41.582

10.  Hybrid neurons in a microRNA mutant are putative evolutionary intermediates in insect CO2 sensory systems.

Authors:  Pelin Cayirlioglu; Ilona Grunwald Kadow; Xiaoli Zhan; Katsutomo Okamura; Greg S B Suh; Dorian Gunning; Eric C Lai; S Lawrence Zipursky
Journal:  Science       Date:  2008-02-29       Impact factor: 47.728

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  376 in total

1.  Differential allelic expression of c.1568C > A at UGT2B15 is due to variation in a novel cis-regulatory element in the 3'UTR.

Authors:  Chang Sun; Catherine Southard; Olufunmilayo I Olopade; Anna Di Rienzo
Journal:  Gene       Date:  2011-04-13       Impact factor: 3.688

Review 2.  MicroRNA regulation of smooth muscle gene expression and phenotype.

Authors:  Hara Kang; Akiko Hata
Journal:  Curr Opin Hematol       Date:  2012-05       Impact factor: 3.284

Review 3.  Evolution of microRNA diversity and regulation in animals.

Authors:  Eugene Berezikov
Journal:  Nat Rev Genet       Date:  2011-11-18       Impact factor: 53.242

4.  Transcriptome-wide analysis of small RNA expression in early zebrafish development.

Authors:  Chunyao Wei; Leonidas Salichos; Carli M Wittgrove; Antonis Rokas; James G Patton
Journal:  RNA       Date:  2012-03-08       Impact factor: 4.942

5.  miR-129-3p controls cilia assembly by regulating CP110 and actin dynamics.

Authors:  Jingli Cao; Yidong Shen; Lei Zhu; Yanan Xu; Yizhuo Zhou; Zhili Wu; Yiping Li; Xiumin Yan; Xueliang Zhu
Journal:  Nat Cell Biol       Date:  2012-06-10       Impact factor: 28.824

6.  Conserved microRNA miR-8 controls body size in response to steroid signaling in Drosophila.

Authors:  Hua Jin; V Narry Kim; Seogang Hyun
Journal:  Genes Dev       Date:  2012-07-01       Impact factor: 11.361

7.  A genome-wide transgenic resource for conditional expression of Drosophila microRNAs.

Authors:  Fernando Bejarano; Diane Bortolamiol-Becet; Qi Dai; Kailiang Sun; Abil Saj; Yu-Ting Chou; David R Raleigh; Kevin Kim; Jian-Quan Ni; Hong Duan; Jr-Shiuan Yang; Tudor A Fulga; David Van Vactor; Norbert Perrimon; Eric C Lai
Journal:  Development       Date:  2012-06-28       Impact factor: 6.868

Review 8.  Mechanisms of control of microRNA biogenesis.

Authors:  Brandi N Davis-Dusenbery; Akiko Hata
Journal:  J Biochem       Date:  2010-09-09       Impact factor: 3.387

9.  miR-451 protects against erythroid oxidant stress by repressing 14-3-3zeta.

Authors:  Duonan Yu; Camila O dos Santos; Guowei Zhao; Jing Jiang; Julio D Amigo; Eugene Khandros; Louis C Dore; Yu Yao; Janine D'Souza; Zhe Zhang; Saghi Ghaffari; John Choi; Sherree Friend; Wei Tong; Jordan S Orange; Barry H Paw; Mitchell J Weiss
Journal:  Genes Dev       Date:  2010-08-01       Impact factor: 11.361

10.  RNase III-independent microRNA biogenesis in mammalian cells.

Authors:  Thomas Maurin; Demián Cazalla; Shiuan Yang; Diane Bortolamiol-Becet; Eric C Lai
Journal:  RNA       Date:  2012-10-24       Impact factor: 4.942

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