Literature DB >> 20833630

Mechanisms of control of microRNA biogenesis.

Brandi N Davis-Dusenbery1, Akiko Hata.   

Abstract

MicroRNAs (miRNAs) are a class of ∼22 nt non-coding RNAs that control diverse biological functions in animals, plants and unicellular eukaryotes by promoting degradation or inhibition of translation of target mRNAs. miRNA expression is often tissue specific and developmentally regulated. Aberrant expression of miRNAs has been linked to developmental abnormalities and human diseases, including cancer and cardiovascular disorders. The recent identification of mechanisms of miRNA biogenesis regulation uncovers that various factors or growth factor signalling pathways control every step of the miRNA biogenesis pathway. Here, we review the mechanisms that control the regulation of miRNA biogenesis discovered in human cells. Further understanding of the mechanisms that control of miRNA biogenesis may allow the development of tools to modulate the expression of specific miRNAs, which is crucial for the development of novel therapies for human disorders derived from aberrant expression of miRNAs.

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Year:  2010        PMID: 20833630      PMCID: PMC2981492          DOI: 10.1093/jb/mvq096

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  103 in total

1.  MicroRNA genes are transcribed by RNA polymerase II.

Authors:  Yoontae Lee; Minju Kim; Jinju Han; Kyu-Hyun Yeom; Sanghyuk Lee; Sung Hee Baek; V Narry Kim
Journal:  EMBO J       Date:  2004-09-16       Impact factor: 11.598

2.  Molecular cloning and expression analysis of a novel gene DGCR8 located in the DiGeorge syndrome chromosomal region.

Authors:  Aiko Shiohama; Takashi Sasaki; Setsuko Noda; Shinsei Minoshima; Nobuyoshi Shimizu
Journal:  Biochem Biophys Res Commun       Date:  2003-04-25       Impact factor: 3.575

3.  Human let-7a miRNA blocks protein production on actively translating polyribosomes.

Authors:  Stephanie Nottrott; Martin J Simard; Joel D Richter
Journal:  Nat Struct Mol Biol       Date:  2006-11-26       Impact factor: 15.369

4.  Short RNAs repress translation after initiation in mammalian cells.

Authors:  Christian P Petersen; Marie-Eve Bordeleau; Jerry Pelletier; Phillip A Sharp
Journal:  Mol Cell       Date:  2006-02-17       Impact factor: 17.970

5.  p68 (Ddx5) interacts with Runx2 and regulates osteoblast differentiation.

Authors:  Eric D Jensen; Lingling Niu; Giuseppina Caretti; Samantha M Nicol; Nadiya Teplyuk; Gary S Stein; Vittorio Sartorelli; Andre J van Wijnen; Frances V Fuller-Pace; Jennifer J Westendorf
Journal:  J Cell Biochem       Date:  2008-04-01       Impact factor: 4.429

6.  Functional interaction between Smad, CREB binding protein, and p68 RNA helicase.

Authors:  Dennis R Warner; Vasker Bhattacherjee; Xiaolong Yin; Saurabh Singh; Partha Mukhopadhyay; M Michele Pisano; Robert M Greene
Journal:  Biochem Biophys Res Commun       Date:  2004-11-05       Impact factor: 3.575

7.  The let-7 target gene mouse lin-41 is a stem cell specific E3 ubiquitin ligase for the miRNA pathway protein Ago2.

Authors:  Agnieszka Rybak; Heiko Fuchs; Kamyar Hadian; Lena Smirnova; Ellery A Wulczyn; Geert Michel; Robert Nitsch; Daniel Krappmann; F Gregory Wulczyn
Journal:  Nat Cell Biol       Date:  2009-11-08       Impact factor: 28.824

Review 8.  Coupling transcription to RNA processing via the p68 DEAD box RNA helicase androgen receptor co-activator in prostate cancer.

Authors:  Emma L Clark; Frances V Fuller-Pace; David J Elliott; Craig N Robson
Journal:  Biochem Soc Trans       Date:  2008-06       Impact factor: 5.407

9.  A feedback loop comprising lin-28 and let-7 controls pre-let-7 maturation during neural stem-cell commitment.

Authors:  Agnieszka Rybak; Heiko Fuchs; Lena Smirnova; Christine Brandt; Elena E Pohl; Robert Nitsch; F Gregory Wulczyn
Journal:  Nat Cell Biol       Date:  2008-07-06       Impact factor: 28.824

10.  Features of mammalian microRNA promoters emerge from polymerase II chromatin immunoprecipitation data.

Authors:  David L Corcoran; Kusum V Pandit; Ben Gordon; Arindam Bhattacharjee; Naftali Kaminski; Panayiotis V Benos
Journal:  PLoS One       Date:  2009-04-23       Impact factor: 3.240

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  101 in total

Review 1.  Role of microRNAs in lymphoid biology and disease.

Authors:  Muller Fabbri; Carlo M Croce
Journal:  Curr Opin Hematol       Date:  2011-07       Impact factor: 3.284

Review 2.  MicroRNA and vascular remodelling in acute vascular injury and pulmonary vascular remodelling.

Authors:  Robert A McDonald; Akiko Hata; Margaret R MacLean; Nicholas W Morrell; Andrew H Baker
Journal:  Cardiovasc Res       Date:  2011-11-07       Impact factor: 10.787

Review 3.  Circulating miRNAs as Diagnostic and Prognostic Biomarkers in Common Solid Tumors: Focus on Lung, Breast, Prostate Cancers, and Osteosarcoma.

Authors:  Michela Bottani; Giuseppe Banfi; Giovanni Lombardi
Journal:  J Clin Med       Date:  2019-10-11       Impact factor: 4.241

Review 4.  Regulation of microRNA biogenesis.

Authors:  Minju Ha; V Narry Kim
Journal:  Nat Rev Mol Cell Biol       Date:  2014-07-16       Impact factor: 94.444

Review 5.  Smad-mediated miRNA processing: a critical role for a conserved RNA sequence.

Authors:  Brandi N Davis-Dusenbery; Akiko Hata
Journal:  RNA Biol       Date:  2011-01-01       Impact factor: 4.652

Review 6.  microRNAs in kidneys: biogenesis, regulation, and pathophysiological roles.

Authors:  Kirti Bhatt; Qing-Sheng Mi; Zheng Dong
Journal:  Am J Physiol Renal Physiol       Date:  2011-01-12

7.  MicroRNA-499 rs3746444 polymorphism and autoimmune diseases risk: a meta-analysis.

Authors:  Lechun Lu; Ying Tu; Lingxin Liu; Jue Qi; Li He
Journal:  Mol Diagn Ther       Date:  2014-04       Impact factor: 4.074

Review 8.  Charity begins at home: non-coding RNA functions in DNA repair.

Authors:  Dipanjan Chowdhury; Young Eun Choi; Marie Eve Brault
Journal:  Nat Rev Mol Cell Biol       Date:  2013-02-06       Impact factor: 94.444

9.  Acetylation of p53 stimulates miRNA processing and determines cell survival following genotoxic stress.

Authors:  Jonathan Chang; Brandi N Davis-Dusenbery; Risa Kashima; Xuan Jiang; Nisha Marathe; Roberto Sessa; Justin Louie; Wei Gu; Giorgio Lagna; Akiko Hata
Journal:  EMBO J       Date:  2013-11-12       Impact factor: 11.598

10.  Developmental programming: gestational bisphenol-A treatment alters trajectory of fetal ovarian gene expression.

Authors:  Almudena Veiga-Lopez; Lacey J Luense; Lane K Christenson; Vasantha Padmanabhan
Journal:  Endocrinology       Date:  2013-03-22       Impact factor: 4.736

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