Literature DB >> 18843486

Playing tag with quantitative proteomics.

Anton Iliuk1, Jacob Galan, W Andy Tao.   

Abstract

There is steady need for new proteomic strategies on quantitative measurements that provide essential components for detailing dynamic changes in many cellular functions and processes. Stable isotope labeling is a rapidly evolving field, which can be used either after protein extraction with chemical labeling, or in cell culture with metabolic incorporation. In this review, we explore the most frequently utilized quantitation techniques with particular attention paid to chemical labeling using different isotopic tags, including a recent labeling strategy-soluble polymer-based isotopic labeling (SoPIL)-that achieves efficient labeling in homogeneous conditions. Special care should be devoted to the selection of appropriate quantitation approaches according to the needs of the sample and overall experimental design. We evaluate recent advances in quantitative proteomics using stable isotope labeling and their applications to current insightful biological inquiries.

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Year:  2008        PMID: 18843486     DOI: 10.1007/s00216-008-2386-0

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  9 in total

1.  Quantification of tryptic peptides in quadrupole ion trap using high-mass signals derived from isotope-coded N-acetyl dipeptide tags.

Authors:  Jongcheol Seo; Hye-Joo Yoon; Seung Koo Shin
Journal:  J Am Soc Mass Spectrom       Date:  2011-07-06       Impact factor: 3.109

2.  Parallel detection of intrinsic fluorescence from peptides and proteins for quantification during mass spectrometric analysis.

Authors:  Jason D Russell; Ryan T Hilger; Daniel T Ladror; Mark A Tervo; Mark Scalf; Michael R Shortreed; Joshua J Coon; Lloyd M Smith
Journal:  Anal Chem       Date:  2011-02-11       Impact factor: 6.986

Review 3.  Current peptidomics: applications, purification, identification, quantification, and functional analysis.

Authors:  David C Dallas; Andres Guerrero; Evan A Parker; Randall C Robinson; Junai Gan; J Bruce German; Daniela Barile; Carlito B Lebrilla
Journal:  Proteomics       Date:  2015-01-21       Impact factor: 3.984

Review 4.  Using extracellular matrix proteomics to understand left ventricular remodeling.

Authors:  Merry L Lindsey; Susan T Weintraub; Richard A Lange
Journal:  Circ Cardiovasc Genet       Date:  2012-02-01

5.  Phosphorylation assay based on multifunctionalized soluble nanopolymer.

Authors:  Anton Iliuk; Juan S Martinez; Mark C Hall; W Andy Tao
Journal:  Anal Chem       Date:  2011-03-11       Impact factor: 6.986

6.  Improved label-free LC-MS analysis by wavelet-based noise rejection.

Authors:  Salvatore Cappadona; Paolo Nanni; Marco Benevento; Fredrik Levander; Piera Versura; Aldo Roda; Sergio Cerutti; Linda Pattini
Journal:  J Biomed Biotechnol       Date:  2010-01-28

7.  Qualitative and quantitative top-down mass spectral analysis of crustacean hyperglycemic hormones in response to feeding.

Authors:  Chenxi Jia; Qing Yu; Jingxin Wang; Lingjun Li
Journal:  Proteomics       Date:  2014-03-20       Impact factor: 3.984

Review 8.  Challenges, current status and future perspectives of proteomics in improving understanding, diagnosis and treatment of vascular disease.

Authors:  J V Moxon; M P Padula; B R Herbert; J Golledge
Journal:  Eur J Vasc Endovasc Surg       Date:  2009-07-09       Impact factor: 7.069

Review 9.  Update on current applications of proteomic in the study of inflammatory bowel disease.

Authors:  Giulia Roda; Alessandra Caponi; Alessandro Sartini; Monica Cevenini; Carolina Colliva; Aldo Roda
Journal:  Ann Gastroenterol       Date:  2012
  9 in total

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