Literature DB >> 18821774

Monitoring water reactions during the S-state cycle of the photosynthetic water-oxidizing center: detection of the DOD bending vibrations by means of Fourier transform infrared spectroscopy.

Hiroyuki Suzuki1, Miwa Sugiura, Takumi Noguchi.   

Abstract

Photosynthetic water oxidation takes place in the water-oxidizing center (WOC) of photosystem II (PSII). To clarify the mechanism of water oxidation, detecting water molecules in the WOC and monitoring their reactions at the molecular level are essential. In this study, we have for the first time detected the DOD bending vibrations of functional D 2O molecules during the S-state cycle of the WOC by means of Fourier transform infrared (FTIR) difference spectroscopy. Flash-induced FTIR difference spectra upon S-state transitions were measured using the PSII core complexes from Thermosynechococcus elongatus moderately deuterated with D 2 (16)O and D 2 (18)O. D 2 (16)O-minus-D 2 (18)O double difference spectra at individual S-state transitions exhibited six to eight peaks arising from the D (16)OD/D (18)OD bending vibrations in the 1250-1150 cm (-1) region. This observation indicates that at least two water molecules, not in any deprotonated forms, participate in the reaction at each S-state transition throughout the cycle. Most of the peaks exhibited clear counter peaks with opposite signs at different transitions, reflecting a series of reactions of water molecules at the catalytic site. In contrast, negative bands at approximately 1240 cm (-1) in the S 2 --> S 3, S 3 --> S 0, and possibly S 0 --> S 1 transitions, for which no clear counter peaks were found in other transitions, can be interpreted as insertion of substrate water into the WOC from a water cluster in the proteins. The characteristics of the weakly D-bonded OD stretching bands were consistent with the insertion of substrate from internal water molecules in the S 2 --> S 3 and S 3 --> S 0 transitions. The results of this study show that FTIR detection of the DOD bending vibrations is a powerful method for investigating the molecular mechanism of photosynthetic water oxidation as well as other enzymatic reactions involving functional water molecules.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18821774     DOI: 10.1021/bi801580e

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  15 in total

1.  Evidence from FTIR difference spectroscopy of an extensive network of hydrogen bonds near the oxygen-evolving Mn(4)Ca cluster of photosystem II involving D1-Glu65, D2-Glu312, and D1-Glu329.

Authors:  Rachel J Service; Warwick Hillier; Richard J Debus
Journal:  Biochemistry       Date:  2010-08-10       Impact factor: 3.162

2.  Gernot Renger (1937-2013): his life, Max-Volmer Laboratory, and photosynthesis research.

Authors:  Ulrich Siggel; Franz-Josef Schmitt; Johannes Messinger
Journal:  Photosynth Res       Date:  2016-06-16       Impact factor: 3.573

3.  D1-Asn-298 in photosystem II is involved in a hydrogen-bond network near the redox-active tyrosine YZ for proton exit during water oxidation.

Authors:  Ryo Nagao; Hanayo Ueoka-Nakanishi; Takumi Noguchi
Journal:  J Biol Chem       Date:  2017-10-18       Impact factor: 5.157

4.  Participation of glutamate-354 of the CP43 polypeptide in the ligation of manganese and the binding of substrate water in photosystem II.

Authors:  Rachel J Service; Junko Yano; Iain McConnell; Hong Jin Hwang; Dimitri Niks; Russ Hille; Tom Wydrzynski; Robert L Burnap; Warwick Hillier; Richard J Debus
Journal:  Biochemistry       Date:  2010-12-08       Impact factor: 3.162

5.  Untangling the sequence of events during the S2 → S3 transition in photosystem II and implications for the water oxidation mechanism.

Authors:  Mohamed Ibrahim; Thomas Fransson; Ruchira Chatterjee; Mun Hon Cheah; Rana Hussein; Louise Lassalle; Kyle D Sutherlin; Iris D Young; Franklin D Fuller; Sheraz Gul; In-Sik Kim; Philipp S Simon; Casper de Lichtenberg; Petko Chernev; Isabel Bogacz; Cindy C Pham; Allen M Orville; Nicholas Saichek; Trent Northen; Alexander Batyuk; Sergio Carbajo; Roberto Alonso-Mori; Kensuke Tono; Shigeki Owada; Asmit Bhowmick; Robert Bolotovsky; Derek Mendez; Nigel W Moriarty; James M Holton; Holger Dobbek; Aaron S Brewster; Paul D Adams; Nicholas K Sauter; Uwe Bergmann; Athina Zouni; Johannes Messinger; Jan Kern; Vittal K Yachandra; Junko Yano
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-20       Impact factor: 11.205

6.  Substitution of the D1-Asn87 site in photosystem II of cyanobacteria mimics the chloride-binding characteristics of spinach photosystem II.

Authors:  Gourab Banerjee; Ipsita Ghosh; Christopher J Kim; Richard J Debus; Gary W Brudvig
Journal:  J Biol Chem       Date:  2017-12-20       Impact factor: 5.157

7.  The S2 state of the oxygen-evolving complex of photosystem II explored by QM/MM dynamics: spin surfaces and metastable states suggest a reaction path towards the S3 state.

Authors:  Daniele Bovi; Daniele Narzi; Leonardo Guidoni
Journal:  Angew Chem Int Ed Engl       Date:  2013-09-25       Impact factor: 15.336

8.  Functional roles of D2-Lys317 and the interacting chloride ion in the water oxidation reaction of photosystem II as revealed by fourier transform infrared analysis.

Authors:  Hiroyuki Suzuki; Jianfeng Yu; Takashi Kobayashi; Hanayo Nakanishi; Peter J Nixon; Takumi Noguchi
Journal:  Biochemistry       Date:  2013-07-01       Impact factor: 3.162

9.  O2 evolution and recovery of the water-oxidizing enzyme.

Authors:  Keisuke Kawashima; Tomohiro Takaoka; Hiroki Kimura; Keisuke Saito; Hiroshi Ishikita
Journal:  Nat Commun       Date:  2018-03-28       Impact factor: 14.919

10.  Substrate-water exchange in photosystem II is arrested before dioxygen formation.

Authors:  Håkan Nilsson; Fabrice Rappaport; Alain Boussac; Johannes Messinger
Journal:  Nat Commun       Date:  2014-07-04       Impact factor: 14.919

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.